Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1668 |
Symbol | |
ID | 3705648 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1861075 |
End bp | 1862097 |
Gene Length | 1023 bp |
Protein Length | 340 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637738145 |
Product | Fatty acid synthesis plsX protein |
Protein accession | YP_343670 |
Protein GI | 77165145 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG0416] Fatty acid/phospholipid biosynthesis enzyme |
TIGRFAM ID | [TIGR00182] fatty acid/phospholipid synthesis protein PlsX |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.587029 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGAGTGTTA CCATCGCGCT AGATGCAATG GGGGGCGATC ATGGCCCCCA GGTAGTTGTT CCTGCCGCAC TTAAAGTGCT TGCCGAAATG ATTAATGTAA AGTTAATTCT AATCGGTGAT CGAGATCTAT TAAATGGTTT AGTGGCGATA CATCGGGGAG AATTGGGAAC ACGTTTGACT ATCCAGCATG CCTCGCAGAA AGTTGAAATG GATGAAGCAC CTTCGCAAGC TTTACGGGCC AAAAAAGATT CCTCCATGCG AATAGCTATT AATTTGGTTA AGAGCAGAAA GGCTGATGCC TGCGTAAGTG CTGGTAATAC TGGTGCCTTG ATGGCCATTG CTCGCTTTGT GCTCAAGACT TTACCGGGGA TTGATCGACC AGCGATTGTT TCAGCTTTGC CCACCATCCG GGGACACTGC TATATGCTAG ACTTAGGCGC TAATGTAGAT TCAAGCGCTC AGAATTTGTA CCAATTTGCC TTGATGGGAT CGGTATTGGC CAGTGCTATT GATAATATTA AAGAACCTTC GGTAGGGTTG CTAAATATCG GCTCGGAAAT TATAAAAGGG AATGAGCGGA TCAAGGAGGC AGGCCGCATG CTTTCCCAGA GTCATTTGAA CTATGTGGGG TTTGTAGAAG GAAATGATGT CTACGAAGGT TGTGTTGATG TGGTTGTCTG CGATGGTTTC GTGGGTAACG TGGCGTTGAA ATCCAGCGAA GGGGTCGCTC GAATGGTACG CCATTATCTC CGGGAGTCAT TCCAACGCAA TTATCTTACT CGCTTTGCAG GCTTTCTTGC TTTACCGGTG CTCAAAGCTT TCCACCAGCG AATGGACCCC CGGCGTTATA ATGGAGCTAA CTTACTAGGA CTTAATGGGG TGGTTATTAA AAGTCATGGA GGAGCGGATA TAACGGCCTT TGCCCATGCC ATTCGCATTG CTGTGATTGA GGCACGTAAA GATGTGCCCC AACATATCAG TGCCCATTTA GAGCCATGGT TATCGGAAGG ACAAGTGGTT TGA
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Protein sequence | MSVTIALDAM GGDHGPQVVV PAALKVLAEM INVKLILIGD RDLLNGLVAI HRGELGTRLT IQHASQKVEM DEAPSQALRA KKDSSMRIAI NLVKSRKADA CVSAGNTGAL MAIARFVLKT LPGIDRPAIV SALPTIRGHC YMLDLGANVD SSAQNLYQFA LMGSVLASAI DNIKEPSVGL LNIGSEIIKG NERIKEAGRM LSQSHLNYVG FVEGNDVYEG CVDVVVCDGF VGNVALKSSE GVARMVRHYL RESFQRNYLT RFAGFLALPV LKAFHQRMDP RRYNGANLLG LNGVVIKSHG GADITAFAHA IRIAVIEARK DVPQHISAHL EPWLSEGQVV
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