| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1609 |
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| Symbol | |
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| ID | 3705732 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1796612 |
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| End bp | 1799446 |
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| Gene Length | 2835 bp |
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| Protein Length | 944 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637738085 |
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| Product | multisensor diguanylate cyclase/phophodiesterase |
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| Protein accession | YP_343614 |
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| Protein GI | 77165089 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG5001] Predicted signal transduction protein containing a membrane domain, an EAL and a GGDEF domain |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box
[TIGR00254] diguanylate cyclase (GGDEF) domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.954205 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCAAGTA AAAAACAGGA GCAAGAGATC GCGCACCGTT ATGATACCTT CCTAGAGGTA
ATGGCCTATG CCGCCGAGCA GCTTTTATAT TCTTCCCCTT GGGAAAAAAA CATCAATAAT
GTTTTAGAAC GGTTAGGCCA AACCGTAGGC GCCTGCCGAA CCTACATTTT TGAAAACCGT
TCTCACAAAG ACCAACTTCT AACCAGCCAA CGTTATGAAT GGACAGCGCC AGGCGTCAAA
CCTCAAATCA ATAATCCTGA ACTGCAGAAT TTTTCCTATA AGGCAGGTGG ATTCCAGCGT
TGGATCAACT TACTGAGTAC AGATCAACTT ATCTGCGGAC GAATCCATGA TTTTCCTTTC
TCGGAACGAG CACTTCTATC ATGCCAGTCT GTCCAATCCA TCGCTGTGGC ACCTATTTTT
GTCCGGGATG GCTGGTGGGG GTTTATCGGC TTTGATCATA CTCGTTATGA ACGCCCTCTT
CTCCCCCCAG AAGAAAATGC GCTTAGAACA TTAGCCAGCA TTTTTGGCGC TGCAATAAGC
TGGAAAAACA TCGCCGAAAG CCAGGAAAAA AACCGGCATC AACTAAAACA GCTCCTTGCT
AGAGAACGGT CCTACCTCCA GCTTTTTGAC GCGATTGGGC GAATTCAGTC ACTTTTCATT
CAGGATGCCA ACCCTTCGGT ACTGTTTGGC AAAGTCCTGC AAGAGGCGCT CACGCTTTCA
AAAAGCGAAT TTGGCTTGCT CGGTGAAATT CGCTACTCAA AGACTGGCAA CTCCTATCTT
AGGACACTTG CCGCCGGCCA TGTTGCCTGC AGCGAGCACG GCTGTTATCT GCGGGCCACA
TGCCCCACAA GCGGCGCGGA AATTCTCCAA CTAAAAACGC TTTTTAACAG GGCTATGAGC
CAGGGCAAGG TTATTATTGC CAACGATATT CGTCATGATT CCTGGGCAGC AGGAATGTTA
AGCCATGATT CTCAAATAAA GCGTTTTCTT GCACTTCCTT TTTACCACCA TAATTCCCTG
TTGGGAATCA TTGGCATCGC CAATCGCGAT AAACCCTATG ATAAAAGCTT GATTAATTAT
CTGAATCCCT TACTTTCCAC TTGTGGAAGC ATTCTTGATG CCTACCATAA CGATCAGCGC
CGAAAAAATG CGGAAAGCCG TCTTCGCCTC ACGGCTAAAG TCTTTGAAAG CACCGTTGAG
GGAGTCATTA TTACTGACAC TAAGGCATAC GTCGTCGATG TGAATGAAGC TTTTACTCAC
ATTACCGGCA TTGCAAGATC GGAAATCATG GGCCGACATC TTAGTACACT CCAGACTAAA
CAGGAGAAGC CGATCTCTTT TCAGCGAGTA CGGCACGCCA TTAAAAGCAC TGGCCAATGG
CAAGGAGAGC TATGGAGTCA GAGAAAAAAT GGAGAGATTT ACCCACTTTG GGTGACGGCC
AATGCTGTTA GAAATTCAAA GGAAGAAATT ACCCATTTTG TGGCCATCTT TTCCGATATC
ACACTGCGCA AACAAACTGA ACAACGACTC TACTATCTCG CTCACCATGA TGCTTTAACG
GGATTACCAA ATCGCTCTCT TTTCCTTGAT CGCCTCGAAC ATGCCATCCA TCATGCCCAG
CGCCATCATC ATCGGATTGC CGTCCTGTTT ATCGATCTTG ATCGTTTTAA ATTTATCAAC
GATACCCTCG GTCATCCCAT CGGGGATATC CTCTTAAAAC AGGTCGCGGA ACGCATGCGG
CTCAATATTC GCGCCGAAGA TACCATTGCC AGACTGGGAG GCGATGAGTT CACGGTCATT
ATCGAAAATT TTACTGATAC CTCGGCTATT TCCCTTATTA CCCAGAAAAT TATTAGCGCT
TGCGAGAAAC CCTTCAACAT TAAGGGTAAT GAATTGTTTG TCTCTGCCAG TATTGGGGTT
AGCCTTTATC CGGAAGATGG CCATGAGGCA AGTATGCTCC TGCAACGTGC CGATGCGGCC
ATGTATCAGG CCAAAAAAAG GGGTAAAAGT TGCTGCCAAT TTTTCACCAC TGAAATCAAC
ACCGCCGCCA CGGAACAGCT TGCGCTTAAA AATCTCCTCC GAAGAGCCCT TGCCCGCAAG
GAATTTCAAT TGTATTATCA ACCAATTATA AATATGGAAA GTGGCGCCAT TGTTTCAGTG
GAAGCATTGA TACGGTGGGT TGACCCAGAA TTAGGCTTAA TCAGTCCCAA TACATTTATT
CCTTTGGCGG AGGAAAACGG GCTCATTCTT CCCCTTGGAG AGTGGGTATT ACAAACGGCT
TGTACGCAAG CTAAAATCTG GAATCAATCC AATCCTTATC CTGTACGGAT CGCCATTAAT
TTATCTGCCC GCCAGCTTGA GCAGACTGAT TTTTCAGAAC GAGTATCAGA AATCCTTAAG
AAGACGCCTT TTCCCACTGA TCACCTGGAA TTAGAATTGA CGGAAAGCAT GCTCATAAAT
CGCATGGAGT CTAGTCTGAA GACTCTCAAT ACCTTAAAAA AAATGGGGTG TCGGTTATCC
TTGGACGATT TTGGAACAGG GTATTCCCCC TTGGCTTATT TAAAGCGTTT CCCAATAGAC
ACGGTCAAAA TTGATCGTTC CTTTGTGCAA GGTATTAGTA TTGATCCCGA TGACGCCGCC
ATCACCACTG CTGTGACCAC GATGGCCCAC AGTTTAAAAC GTGCAGTGAT TGCAAAAGGG
GTAGAAACGC GGGAGCAACT AAACTTTTTG AATGAAATCA AAGTTGATGA AGCACAAGGT
TACTTCATCA GTTACCCGGT TCCTGCTGAG GAACTTACCC AGAAATTAAG GGAAAAATCT
CACCTCTTAT CATGA
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| Protein sequence | MASKKQEQEI AHRYDTFLEV MAYAAEQLLY SSPWEKNINN VLERLGQTVG ACRTYIFENR
SHKDQLLTSQ RYEWTAPGVK PQINNPELQN FSYKAGGFQR WINLLSTDQL ICGRIHDFPF
SERALLSCQS VQSIAVAPIF VRDGWWGFIG FDHTRYERPL LPPEENALRT LASIFGAAIS
WKNIAESQEK NRHQLKQLLA RERSYLQLFD AIGRIQSLFI QDANPSVLFG KVLQEALTLS
KSEFGLLGEI RYSKTGNSYL RTLAAGHVAC SEHGCYLRAT CPTSGAEILQ LKTLFNRAMS
QGKVIIANDI RHDSWAAGML SHDSQIKRFL ALPFYHHNSL LGIIGIANRD KPYDKSLINY
LNPLLSTCGS ILDAYHNDQR RKNAESRLRL TAKVFESTVE GVIITDTKAY VVDVNEAFTH
ITGIARSEIM GRHLSTLQTK QEKPISFQRV RHAIKSTGQW QGELWSQRKN GEIYPLWVTA
NAVRNSKEEI THFVAIFSDI TLRKQTEQRL YYLAHHDALT GLPNRSLFLD RLEHAIHHAQ
RHHHRIAVLF IDLDRFKFIN DTLGHPIGDI LLKQVAERMR LNIRAEDTIA RLGGDEFTVI
IENFTDTSAI SLITQKIISA CEKPFNIKGN ELFVSASIGV SLYPEDGHEA SMLLQRADAA
MYQAKKRGKS CCQFFTTEIN TAATEQLALK NLLRRALARK EFQLYYQPII NMESGAIVSV
EALIRWVDPE LGLISPNTFI PLAEENGLIL PLGEWVLQTA CTQAKIWNQS NPYPVRIAIN
LSARQLEQTD FSERVSEILK KTPFPTDHLE LELTESMLIN RMESSLKTLN TLKKMGCRLS
LDDFGTGYSP LAYLKRFPID TVKIDRSFVQ GISIDPDDAA ITTAVTTMAH SLKRAVIAKG
VETREQLNFL NEIKVDEAQG YFISYPVPAE ELTQKLREKS HLLS
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