Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1600 |
Symbol | |
ID | 3705762 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1779335 |
End bp | 1780756 |
Gene Length | 1422 bp |
Protein Length | 473 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637738076 |
Product | Na+/solute symporter |
Protein accession | YP_343605 |
Protein GI | 77165080 |
COG category | [E] Amino acid transport and metabolism [R] General function prediction only |
COG ID | [COG0591] Na+/proline symporter |
TIGRFAM ID | [TIGR00813] transporter, SSS family |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.0101485 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATCATCG TCCTCAATTT TTTATTCTTT TTAGCGATTT TTGCGGGAGT TGGTTTGTTG TCGGCACGCA AGTCCCAAGG CACCCGCCAT GATTACTATA TGGCCAACAA TTCGGTAAAA CCTTGGCTAG TGGGTTTATC GGCGGTCGCC ACTAACAACA GCGGCTACAT GTTTATCGGG GTTATCGGTT ACACCTATCT GACCGGTTTG GCGTCGCTAT GGCTGGTGAT CGGCTGGATT CTGGGGGACT TTATCGCCTC CCAATTGGTG CATCGGCATC TGCGGGAAGC CACGGTTCGC ACCGGCGAGG TCACCTATGG GGGCGTGCTG AGTCAGTGGT ATGGCGCCGA ATTGGCGGGA CTGCGGCGAA TAGCAGGCCT TCTCACGGTC ATTTTTCTGG GTATCTACGC GGCAGCTCAG CTAAATGCTG GCAGTAAGGC CCTGCATGTA TTATTCGACT GGCCTTTCTA CGCGGGCGCA GTGATCGGCG CGGTGCTAGT AGTGGGTTAT TGCTTTGCCG GCGGCATCCG TGCTTCCATC TGGACGGATG CCGCCCAATC CTTTGTCATG TTCGGCGCCA TGCTGACCTT GCTTTACGCG GCCGTCATGG CTTTGGGGGG CCCGCAAGGC GCCTGGGGAG AAATGGGTAA AATCAAAGGC TTTCTGGACT GGTCCCCCGC AGATACGCTG ATTCCAGGGA TGGCGGGGCT TGCCTTTTTT GCTCTGGGCT GGTTTTTTGG TGGTTTTTCC GTGGTGGGCC AGCCCCACAT CATGATCCGT TTTATGGCCC TGGATAATCC TAGCCATATG GCCCGGGCGC GGCTCTATTA TTATCTCTGG TATACCCTAT TCTACCTGTT GGCCACAGGC GTGGGCATGC TCTCCCGGGT GTATTTACCA GAAGCACAGA ACTTTGACCC GGAACTGGCC CTGCCCACCA TGGCCCTGCA ACTATTACCT GATATGCTGG TAGGATTGAT CCTGGCCGGT ATTTTTGCAG CCACCATGTC CACGGCGGAT TCCTTGATAT TATCTTGTTC AGCGGCCCTT ACCCATGATT TACTGCCCCA CCAATTTGAG AATATGGGCA AGATAAAGCT GGCCACGGTC GTGGTAACGG CCCTAGCCTT AGCCATTGCT TTGAGCAGCA ACGAAAGCGT GTTTACGTTG GTGATTTTGT CTCTCTCCTT CCTGGCATCA GCTTTTGTGC CTTTATTATT GATTTACACT CTCGGCGGCC AGCCCACGGA CCGGCAGGCC TTAATCATTT TAGGAGCGGG CCTCGGCGTG GCCATAGTCT GGCGCTGGCT GGGCTTCCAT CACGCCCTCT ACGAAGGGAT GCCCGGCATT CTGGCGGGCC TACTGGCTTT TGGCATGCTG CGACTGTTCG GAAAAGTCGC TAGAAGCTTG GTAAGATCAT AG
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Protein sequence | MIIVLNFLFF LAIFAGVGLL SARKSQGTRH DYYMANNSVK PWLVGLSAVA TNNSGYMFIG VIGYTYLTGL ASLWLVIGWI LGDFIASQLV HRHLREATVR TGEVTYGGVL SQWYGAELAG LRRIAGLLTV IFLGIYAAAQ LNAGSKALHV LFDWPFYAGA VIGAVLVVGY CFAGGIRASI WTDAAQSFVM FGAMLTLLYA AVMALGGPQG AWGEMGKIKG FLDWSPADTL IPGMAGLAFF ALGWFFGGFS VVGQPHIMIR FMALDNPSHM ARARLYYYLW YTLFYLLATG VGMLSRVYLP EAQNFDPELA LPTMALQLLP DMLVGLILAG IFAATMSTAD SLILSCSAAL THDLLPHQFE NMGKIKLATV VVTALALAIA LSSNESVFTL VILSLSFLAS AFVPLLLIYT LGGQPTDRQA LIILGAGLGV AIVWRWLGFH HALYEGMPGI LAGLLAFGML RLFGKVARSL VRS
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