| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1535 |
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| Symbol | |
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| ID | 3705832 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1702681 |
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| End bp | 1705905 |
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| Gene Length | 3225 bp |
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| Protein Length | 1074 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 637738020 |
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| Product | heavy metal efflux pump |
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| Protein accession | YP_343549 |
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| Protein GI | 77165024 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium) |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTAAGTG AACACCAGGG CAAGGGGCAT CCCCCCGCGG AAGGCACCGA TCTTAGCGCG
CTGCAGCGTC TCATCGGCTA CTGCGCGCGC AACCGACTGT TAACCCTGGT CGCCATTGCG
ACATTGGCTT TCGGCGGCTA TCGGGCGCTG ATACAAGCGC CGCTGGACGC CATTCCGGAT
CTCTCCGATG TGCAAGTGAT TCTCTTCACC GAGTGGCCGG GGCGCAGTCC GGACCTGGTG
GAGGATCAGA TCACCTATCC CCTGACAACG ACCTTGCTGG CGGCGCCTGG CGTCAACTAC
GTGCGCGGTC AAAGCTTTTT TGGACTCTCC TTCGTCTACG TCATTTTCGA GGACGGCGTG
GATATGTACT GGGCGCGCTC GCGGGTGCTG GAATATTTGA ACAGCGCCAC GGCGGATCTA
CCTGAAAACG TCAACCCCAC CCTGGGGCCG GACGCCACCG GAGTCGGCTG GGTGTACCAG
TACGCGCTCA GGGATACCAG CGGTCGCCAT AATCTGGCGG AGTTGCGCTC CTTGCAGGAC
TTCAACCTGC GTTATGCGCT GGAGGCCATT GAAGGCGTGG CCGAGGTGGC GTCCGTAGGC
GGCTATAAGC GCGAATACCA GATCAGCCTC GATCCCAACA AGCTGGCTTC ACTGGACATT
CCGCTCAAGC GGGTAGTCGA GGCGGTGCGC GCTGTCAACA ACGAGGTCGG CGGACGCCTC
CTGGAGGTGG CCGGCTACGA GCACTTCATC CGCGGCCGAG GTTACGTGCA ATCGGTTACC
GATCTGGAAC AGGTCGTTCT GAAGACGACC ACGGGCGGGG TCCCCCTTAC CCTCAAGGAG
GTCGGCACGG TAGCGCTCGG GCCGGCAATG CAGCGCGGCC AGGCGGAATT GGATGGGGAG
GGCGTCACCG TCGGCGGCAT TGTGGTGATG CGCTACGGCG AAAACGCCCT ATCGGTGATC
AACCGCGTGA AGCAGCGGAT GGCCGAGATC AAACCGGGGC TACCCGAGGG TGTGGAGATC
GTACCGGTTT ATGACCGCTC CACCCTGATC AAGCAGGCCA TTGATACCCT GCAAAAGACT
CTGATCGAAG AGATGATCAT CGTCTCACTG GTGATCCTGG CCTTTCTGCT GCACCTACGC
TCCGCGCTGG TGGCGGTCAT CACTTTACCG GTGGCGGTGC TTATCGCCTT CATTCCCATG
GCTTATCAGG GACTGACCGC CAATATCATG TCGCTGGGCG GCATTGCGGT CGCCATCGGC
GCCATGGTGG ATGCGGCCAT TGTCATCATC GACAACATCC ACAAGCGGTT GCACCAGTGG
CAGGCTGGGG ACACGCCGTC GGAGGAGAGG GCAAAATCGC GCATCGATGT GGTGATCGAG
GCCATGCAGG AGGTGGGGCC GAGCATTTTC TTCTCGTTGT TGATTATCAC CGTCTCCTTC
CTGCCGGTGT TCGCGTTGGA GGGCACCGAG GGGCGGCTGT TCAAGCCATT AGCCTACACC
AAGACCTATT CCATGGCGTT TGCCGCGCTC CTCTCCCTCA CCTTGATTCC AGCCCTGGCC
GTATGGCTCA TCCGCGGGCG TATCCGCGCT GATCGCAGCA GGCTCAACCG CTGGCTGGTG
GCGGCCTATC GGCCCATGGT ACGGTTGGCC ATCCAGCTAC GCTGGTGGGT GGTGGGGTTG
GCCGTAATTG CCTTATTCGC CACAGTGATC CCGTTTCGAT CACTTGGCAC TGAGTTCATG
CCGCCGCTCA ACGAGGGATC GATTCTCTAC ATGCCTACCG CGCTGCCGGG CATGTCCATT
ACCGAGGCGA CCCAAACCTT GCAGACCATG GATCGGATTA TCGCCGGCAT CCCGGAAGTG
GAGCACGTAT TCGGCAAGGT CGGCCGTGCC ACTAGCGCCA CCGATCCGGC CCCCCTATCC
ATGGTGGAGA CGGTAATCAC CCTCAAGCCC AAGAAACAAT GGCGTCAAGG GCTCGCCTGG
GAGGATCTGA TTCAGGAGCT GGACCAGAAG CTGCGTTTTC CCGGGATGCC CAACATTTTC
TGGATGCCCA TCCAGACCCG CACCGAAATG CTGGCTACCG GTATTCGCTC CGCCCTGGGG
ATCAAAGTCT TCGGGCCGGA TCTGGCCACC ATCGAAAAAA CGGGTATCGC CATTGAGAAA
ATCCTACAGA ATGATCCTCG CACTACTCCC CATACCCGTA GTGCGTTCGC CGAGCGCACC
ACCGGCGGCT ATTTCCTCGA TTTCACTATC CACCGGGTCA GCGCCGCCCG CTTCGGTCTC
AACGTCGAAG ACGTCCAGCG CGTCATCATG GCGGCTATCG GCGGAGCCGT CGTATCCCAG
ACCGTGGAGG GGCGCGAGCG CTACAATATC CTGGTGCGCT ATGGGCGTAA CTACCGCGAT
AATATCGCCG CCTTGGAACG GGTGCTGGTG GCAACGCCAA CCGGCGCCCA AATTCCCATT
ACCCAGGTAG CCGATATTGC CTTTACCACC GGCCCGCCGG CGATCCGCAG CGAGGACGGC
CAACTCGTGG GTTTTGTGTT TGTGGATGTC AAGCCGAGCA TTGGGATCGC TGACTATGTG
GCGTTAGCCA AGCAGGCAGT TGCTGATCGC GCCGCGATTC CCGCGGGCTA CCGGCTCGAG
TGGGCAGGAC AGTTTCAATA TTTCGAGCAG GCCAAGGCCA AGCTCCAGGT GCTCCTGCCG
GCAACCCTGT TCCTGATCTT CTTCATGCTA TTTATGCACC GGGGCTCCCT TACGGAAACA
TTCATTATCA TGGTCAGCGT GCCATTTTCC CTGGTCGGTG CCGTATGGCT GCTGTGGTTC
CTGGACTACA AGCTAAGCGT GGCCGTGTGG GTCGGCATGA TTGCGGTGGC TGGCCTTGCG
GTTGAGCTGG GTCTGCTGAT GATGGTCTAT CTGGATCTGG CATACCGGGC GCGCTGGGCA
GAGGGGCGCC TAAGAACGCG TGGTGACCTG CGCGAGGTCA TCCAGGAAGG CGCTAGCATG
CGCATCCGCC CCATGCTTAT GACCGGTATG ACCCTGTTCG TGGGCCTGAT GCCTATCCTA
TGGAGTACCG GCAGCGGCGC GGATGTGATG CAGCGTATCG CCGCTCCGAT GATTGGCGGA
GTGATCTCAG CGCTAGCTAT GGTGCTGATT GTTTTCCCGG CGATCTTTGC TATCTGGAAG
AGACGGCGCC TGCGCGTAAA CCGGGGCGGT ACAACAATAA CGTAA
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| Protein sequence | MVSEHQGKGH PPAEGTDLSA LQRLIGYCAR NRLLTLVAIA TLAFGGYRAL IQAPLDAIPD
LSDVQVILFT EWPGRSPDLV EDQITYPLTT TLLAAPGVNY VRGQSFFGLS FVYVIFEDGV
DMYWARSRVL EYLNSATADL PENVNPTLGP DATGVGWVYQ YALRDTSGRH NLAELRSLQD
FNLRYALEAI EGVAEVASVG GYKREYQISL DPNKLASLDI PLKRVVEAVR AVNNEVGGRL
LEVAGYEHFI RGRGYVQSVT DLEQVVLKTT TGGVPLTLKE VGTVALGPAM QRGQAELDGE
GVTVGGIVVM RYGENALSVI NRVKQRMAEI KPGLPEGVEI VPVYDRSTLI KQAIDTLQKT
LIEEMIIVSL VILAFLLHLR SALVAVITLP VAVLIAFIPM AYQGLTANIM SLGGIAVAIG
AMVDAAIVII DNIHKRLHQW QAGDTPSEER AKSRIDVVIE AMQEVGPSIF FSLLIITVSF
LPVFALEGTE GRLFKPLAYT KTYSMAFAAL LSLTLIPALA VWLIRGRIRA DRSRLNRWLV
AAYRPMVRLA IQLRWWVVGL AVIALFATVI PFRSLGTEFM PPLNEGSILY MPTALPGMSI
TEATQTLQTM DRIIAGIPEV EHVFGKVGRA TSATDPAPLS MVETVITLKP KKQWRQGLAW
EDLIQELDQK LRFPGMPNIF WMPIQTRTEM LATGIRSALG IKVFGPDLAT IEKTGIAIEK
ILQNDPRTTP HTRSAFAERT TGGYFLDFTI HRVSAARFGL NVEDVQRVIM AAIGGAVVSQ
TVEGRERYNI LVRYGRNYRD NIAALERVLV ATPTGAQIPI TQVADIAFTT GPPAIRSEDG
QLVGFVFVDV KPSIGIADYV ALAKQAVADR AAIPAGYRLE WAGQFQYFEQ AKAKLQVLLP
ATLFLIFFML FMHRGSLTET FIIMVSVPFS LVGAVWLLWF LDYKLSVAVW VGMIAVAGLA
VELGLLMMVY LDLAYRARWA EGRLRTRGDL REVIQEGASM RIRPMLMTGM TLFVGLMPIL
WSTGSGADVM QRIAAPMIGG VISALAMVLI VFPAIFAIWK RRRLRVNRGG TTIT
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