Gene Noc_1390 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1390 
Symbol 
ID3706076 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1540323 
End bp1540964 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content52% 
IMG OID637737884 
ProductGTP cyclohydrolase I 
Protein accessionYP_343413 
Protein GI77164888 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0302] GTP cyclohydrolase I 
TIGRFAM ID[TIGR00063] GTP cyclohydrolase I 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATACGA AATTGACCAA GGTGGTGCGG GAAGGCCGCT ACATTGGCAG CCTGGATGTG 
AAGCCGGGGG AGCATTATGA CCCGGAATTC GAAGCCAGCG TGGAGGAAAT TTTAACCCGC 
TTGGGCGAAG ATCCCAAACG TGAGGGACTT AAACGTACTC CACAGCGAGT TGCTAAAGCC 
CTTGATTTTC TTACGAGTGG TTATCATATG ACGGTGGAAG AGGTGGTCAA GGATGCCCTC 
TTTGAGGATG AATGCGAGGA AATGGTTATT GTCAAGGATG TGGAATTCTA TTCTCTGTGT 
GAGCATCACA TGCTGCCTTT TTTCGGACGG GCCCATGTGG GCTACCTGCC GAAGGGACGC 
ATTGTGGGGC TGAGTAAAAT CGCCCGGGTG ATTGATGTCT TTGCCCGGCG GCTCCAGGTG 
CAAGAACGCC TCACCACTCA AATTGCGAGT GGGTTAATGG CAGTACTTAA TGCCCGCGGC 
GTTGGCGTTG TTTTGGAAGC TTGTCATTTT TGTATGGTCA TGCGAGGCGT GCAGAAACAG 
AATAGCCAGA CGGTTACCAG TGCTATGTTG GGGACATTTC GCGAGGACTC ACGGACTCGG 
GCCGAGTTTA TGGAGTTAAT ACGCCGTTCC TCGGTCAGTT AA
 
Protein sequence
MDTKLTKVVR EGRYIGSLDV KPGEHYDPEF EASVEEILTR LGEDPKREGL KRTPQRVAKA 
LDFLTSGYHM TVEEVVKDAL FEDECEEMVI VKDVEFYSLC EHHMLPFFGR AHVGYLPKGR 
IVGLSKIARV IDVFARRLQV QERLTTQIAS GLMAVLNARG VGVVLEACHF CMVMRGVQKQ 
NSQTVTSAML GTFREDSRTR AEFMELIRRS SVS