Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1354 |
Symbol | |
ID | 3706118 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1500026 |
End bp | 1500685 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 637737849 |
Product | two comoponent transcriptional regulator |
Protein accession | YP_343378 |
Protein GI | 77164853 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.12417 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCGCCTGC TGCTGGTGGA AGACAATGTG GCCCTGGCCG ATGAACTTTT GCCTTTGTTT AAGGGCTATG GCTACGCGGT GGATTGGCGG GTGGATGGTC GGGATGCATT ACTGGCGGTT CACGATGAAT CTTATGATAT GGTCGTTCTG GATCTGGGCC TGCCGGGCCT GGATGGTCTT CAGGTGCTGC AGCACTGGCG TGCTGAGGGG GTAACTCTGC CGGTGCTGAT TCTCACTGCC CGGGATGCCT GGGCAGAGCG TCTGGAAGGC TTGCGCGCTG GTGCCGACGA TTATCTGAGC AAGCCATTCC ACCCGGACGA GTTGCTATTG CGGGTGCAAG CAGTGTTGCG GCGCAGCCAT GGCACGGTCA ATAGCCCGCG GCTGGAAGCC GGGGGGCTGG CCCTGGATGA AGACCGACAG AGTGTTTGGC AGGGGGATCA GGAATACGAA CTGACCCGGG GGGAATTTCG CTTATTGCGT TGCTTTATGC TGCACCCGGG CAAGGTGCTT AGTCGGATGG AGCTGAGCGA ACATCTCTAT GATGGTGAAA GCGAGCGGGA CAGCAATGTA TTGGAGGTGC ATATTAGCCG GCTACGCCGC AAACTGGGTG ACCCAGTGAT TGAAACCCGT CGGAACCAAG GCTACCGCTT CAAGAAATGA
|
Protein sequence | MRLLLVEDNV ALADELLPLF KGYGYAVDWR VDGRDALLAV HDESYDMVVL DLGLPGLDGL QVLQHWRAEG VTLPVLILTA RDAWAERLEG LRAGADDYLS KPFHPDELLL RVQAVLRRSH GTVNSPRLEA GGLALDEDRQ SVWQGDQEYE LTRGEFRLLR CFMLHPGKVL SRMELSEHLY DGESERDSNV LEVHISRLRR KLGDPVIETR RNQGYRFKK
|
| |