| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1340 |
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| Symbol | |
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| ID | 3706143 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1486892 |
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| End bp | 1490035 |
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| Gene Length | 3144 bp |
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| Protein Length | 1047 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637737836 |
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| Product | heavy metal efflux pump |
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| Protein accession | YP_343365 |
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| Protein GI | 77164840 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG3696] Putative silver efflux pump |
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| TIGRFAM ID | [TIGR00914] heavy metal efflux pump (cobalt-zinc-cadmium)
[TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.197837 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTGAAC GGTTATTAAG ATCCTCTATC GAGCACCGGG GATTGGTCAT GCTGGCCATG
GTGGGGCTGA TCCTGCTGGG AATTTATAAC TTCCAGCGTT TGTCCATCGA CGCGGTGCCT
GATATCACCA ACATCCAGGT CCAGATCAAT ACCGCCGCGC CCGGCTACTC GCCCCTCGAA
ACCGAGCAAC TCATCACCTT CCCGGTGGAG CTGGCCATGT TGGGCGCTCC CCGGCTCCAG
GAGACCCGTT CGATTTCCAA ATATGGGCTC TCCCAGGTGA CCGTGATCTT CGAGGAAGGT
ACGGATATCT ATTTTGCCCG CCAGCAAATC AACGAGCGCA TCCAGCAGGC CAAGGGCCAG
CTTCCCTCGG GCATTGAGCC CCGCATGGGG CCTATCGCGA CGGGACTGGG GGAAATCGTT
CTCTGGACCA TGGAGGCGGA ACCCGGGGCG CGCCAGCCAG ATGGTAGTCC CGTGACCAGT
ACATATCTGC GCACCCTGCT GGATTGGGTG ATTCGTCCCC AGCTTCTTAC CCTCCCTGGG
GTGACGGAAG TCAACAGCAT CGGCGGCTAT AAGAAACAAT ATCATGTGAC CCCGAGTCCG
GAAAAGCTTA TCGCCTATGG GCTTAGCTTC CGGGACGTTA TGACGGCCCT GGCGGAGAAC
AATCAAATGA AGGGGGCCGG CTATATCGAG CACCACGGGG AGCAATTCCT GATCCGGATT
CCAGGGCGGG TTTATACGCT GGAAGAGATC CGTAATATCC GGGTAGGCAC CTATCAGGGC
ATCCCCATCC TTATTAAGGA CCTAGCGGAA GTTTTGCTGG GTAAGGAATT ACGCACGGGT
GTGGCCACGA GAGACGGCCA GGAAGCGGTC ATCGGCACTG CTTTTATGCT CATGGGAGAA
AATAGCCGCG CTGTGGCTCA GGCGGTGGGA GAAAAGCTCA CTGAAGCCAA TCGCTCCTTG
CCGGAAGGAG TGGAAGCCGA GATTTTCTAT GACCGGACGA ACTTGGTGGA CAAGGCGGTC
GTCACGGTAC GGAACAATCT GGTGGAAGGG GCGGCTCTGG TGATCGCCGT ATTGTTTTTT
TTGCTGGGCA ATATCCGGGC GGCGCTGATC ACCGCCATGG TGATCCCTCT GTCCATGTTG
TTTGCCATCA CCGGTATGGT ATCGGAGGGG GTAAGCGCCA ACTTGATGAG CCTGGGGGCC
ATTGATTTTG GCATCATCGT GGATGGCGCG GTGGTCATTG TGGAGAATAG CGTGCGCCAT
TTGGCGGAGG AGCAACAGCG GCGGGGACGG ACGCTAACTC TTTCTGAACG CCTCAAAGTG
GTGTATGAAT CTTCCGAGGA AGCCCGTCGA GCGATCCTGT TTGGGCAGAT GATTATCATG
GTGGTTTACA TTCCCATTTT CGCCCTCTCC GGGGTAGAAG GCAAAATGTT CCACCCCATG
GCTCAGACCG TCATTATGGC GCTGTTTGGG GCCATGATTC TTTCCATTAC CTTCGTCCCC
GCCGCTGTGG CTTTGTTCAT CGGCAAGCGG GTTTCGGAAA AGGAAAATTT CTTCATGAGA
TGGGGTAGCA AGGCCTATCT GCCCACCCTT GACTTTGCTT TGCATCACCG CACCTTAATG
GTGACCTCTG CCGTGGTCAT CGTGGCCTTG AGTGGATTGC TGGCGACCCG CCTGGGCACG
GAGTTTGTGC CTAGCCTGGA TGAGGGGGAT ATTGCGCTCC AGGTTTTGCG CACCCCGGGC
ACGGGCCTCC AGCAATCCAT TGCCATGCAA GAGAAGGTAG AGCAAGCGTT CAACACGTTT
CCGGAAGTAG AAACGGTCGC GGCCCGGATT GGGACGGCGG AGGTGGCCAC CGATGTGATG
GGGCCCAACA TCAGCGATAT CTATATCATG CTCAAGCCTC GGGAAGAATG GCCCGACCCG
GACCGGCCCA AGGAGGATCT CATCGAGGCC ATGTCCCAGC GGATCGCCCG GCTTCCCGGC
GGCAAGTACG AATTTAGCCA GCCCATTGAG CTGCGTTTTA ATGAGTTGCT TTCCGGGGTT
AAAGCCGATG TAGCGGTCAA GGTCTTTGGC GATAATAGGT CGGTTTTGTT AGAGACGGCG
GAACAGATCG CGGTTGTCCT CAGAACCGTG CCGGGGGCCT CGGATGTACG GGTAGAGCAA
GTCACGGGGT TGCCGGTGCT AACCGTGGAG ATAAAACGGC CGGAGCTGGC CCGCTACGGG
CTCAATGTGG CCGATATTCA ACGAACCGTC GAGGCCGCCA TGGGCGGGGT GGCGGTAGGT
AAAATCTATC AAGGGGATCG CCGCTTCGAT TTGGTGGTGC GCTTACCGGA GCGATACCGG
ACGGATGTGG ATGCCTTAAG GCGCTTGCCC ATCCTTATTC CGCCAAGTCT TGGGGCTAGG
GCTGGGGCTG CCCAGATTCC AGCTCCGGCT TATATTCCCC TGAGCACCAT CGCCGAGGTG
CAAATAAGTC CAGGACCTAA CCGTATTAGC CGGGAGAACA GTAAGCGCCG AGTGACCACC
ACCTTCAATG TCCGGGGCCG GGATATGGGC TCCGTGGTGG CGGAAGCACA AGCCAAAATT
CAGGCACGGG TGGAGATCCC GCCAGGCTAT TGGATCGACT GGGGCGGCCA ATTTGAACTG
ATGACCGAGG CGGCTGAGCG CCTGAGCCTT GTGGTCCCCG TTGCTCTGTT GCTCATCTTT
ATTTTTCTCT ATAGCACCTT TGGCAATCTG AAAGATGGGT TATTGGTCTT TACCGGTGTA
CCCTTTGCCC TCACGGGGGG CGTACTGAGC CTGTGGTTGC GGGAAATTCC CCTGTCCATT
TCCGCAGGAG TGGGATTTAT TGCCCTCTCC GGAGTGGCGG TGCTCAATGG GTTAGTGATG
ATCACGTTCA TTCGCATGTT GCGCGATCAG GGCTTGTCCC TAGAAGAGGC CATCCGCCAG
GGGGCCCTTA CTCGCTTACG CCCGGTGCTC ATGACCGCCC TGGTTGCTTC CCTGGGTTTT
GTGCCCATGG CCCTGGCCAC CAGCACCGGG GCGGAGGTGC AGCGGCCCTT GGCTACGGTG
GTCATCGGGG GGATCATCTC TTCGACCCTA TTGACCCTTC TGGTATTACC CGTGCTTTAC
CGGATAATCC ATTACAGGGA GTAA
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| Protein sequence | MFERLLRSSI EHRGLVMLAM VGLILLGIYN FQRLSIDAVP DITNIQVQIN TAAPGYSPLE
TEQLITFPVE LAMLGAPRLQ ETRSISKYGL SQVTVIFEEG TDIYFARQQI NERIQQAKGQ
LPSGIEPRMG PIATGLGEIV LWTMEAEPGA RQPDGSPVTS TYLRTLLDWV IRPQLLTLPG
VTEVNSIGGY KKQYHVTPSP EKLIAYGLSF RDVMTALAEN NQMKGAGYIE HHGEQFLIRI
PGRVYTLEEI RNIRVGTYQG IPILIKDLAE VLLGKELRTG VATRDGQEAV IGTAFMLMGE
NSRAVAQAVG EKLTEANRSL PEGVEAEIFY DRTNLVDKAV VTVRNNLVEG AALVIAVLFF
LLGNIRAALI TAMVIPLSML FAITGMVSEG VSANLMSLGA IDFGIIVDGA VVIVENSVRH
LAEEQQRRGR TLTLSERLKV VYESSEEARR AILFGQMIIM VVYIPIFALS GVEGKMFHPM
AQTVIMALFG AMILSITFVP AAVALFIGKR VSEKENFFMR WGSKAYLPTL DFALHHRTLM
VTSAVVIVAL SGLLATRLGT EFVPSLDEGD IALQVLRTPG TGLQQSIAMQ EKVEQAFNTF
PEVETVAARI GTAEVATDVM GPNISDIYIM LKPREEWPDP DRPKEDLIEA MSQRIARLPG
GKYEFSQPIE LRFNELLSGV KADVAVKVFG DNRSVLLETA EQIAVVLRTV PGASDVRVEQ
VTGLPVLTVE IKRPELARYG LNVADIQRTV EAAMGGVAVG KIYQGDRRFD LVVRLPERYR
TDVDALRRLP ILIPPSLGAR AGAAQIPAPA YIPLSTIAEV QISPGPNRIS RENSKRRVTT
TFNVRGRDMG SVVAEAQAKI QARVEIPPGY WIDWGGQFEL MTEAAERLSL VVPVALLLIF
IFLYSTFGNL KDGLLVFTGV PFALTGGVLS LWLREIPLSI SAGVGFIALS GVAVLNGLVM
ITFIRMLRDQ GLSLEEAIRQ GALTRLRPVL MTALVASLGF VPMALATSTG AEVQRPLATV
VIGGIISSTL LTLLVLPVLY RIIHYRE
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