Gene Noc_1336 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1336 
Symbol 
ID3706139 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1483507 
End bp1484097 
Gene Length591 bp 
Protein Length196 aa 
Translation table11 
GC content49% 
IMG OID637737833 
Producthypothetical protein 
Protein accessionYP_343362 
Protein GI77164837 
COG category[S] Function unknown 
COG ID[COG3247] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.416394 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACTGAAA TAACGAGCAA GACATTTACC AAGGAACGGG CTCCCGAAAT AGAGAGAGTA 
TTCGGAGATC TAGGTAAACA CTGGGGCTGG TTATTAGCCT TGGGCATGTT GTTCATAGTA 
TTGGGAACGA TTGCGCTTGG AATGAGTGTG ACCCTTACGG TTGTCACCGT GCTGTTCTTC 
GGCGTTCTGC TATCGATAGG CGGGATTTTC CAAATTGTTG AGGCATTCAA ATGTAAGGGG 
TGGAGAAGTG TCTTGCTGCA TATTTTGATT GCGCTGCTCT ATATAACGGC TGGTGTCATG 
TTAATAACTG AACCGATTGC CGGTTCGCTA GCGTTAACGG CCCTTCTGGG TGGTGCTTTC 
GTTGCGACGG GAGTTTTACG GATTGTAATG GGCTTCCATC TAAAGGGCAC CGGTGTTCGC 
TGGGGTTGGG TTGTGTTTGC CGGGGTGGTA TCGCTAGTTC TGGGCGGGAT GATCCTTTTT 
CAATGGCCCG TTTCGGCGTT GTGGGTAATA GGTCTTCTGG TGGCAATTGA AATGCTCTTT 
CACGGCTGGT CGTATGTGAT GATTGCGTTG GCTGCGAAAT CAATCAGGTA A
 
Protein sequence
MTEITSKTFT KERAPEIERV FGDLGKHWGW LLALGMLFIV LGTIALGMSV TLTVVTVLFF 
GVLLSIGGIF QIVEAFKCKG WRSVLLHILI ALLYITAGVM LITEPIAGSL ALTALLGGAF 
VATGVLRIVM GFHLKGTGVR WGWVVFAGVV SLVLGGMILF QWPVSALWVI GLLVAIEMLF 
HGWSYVMIAL AAKSIR