Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1273 |
Symbol | |
ID | 3706346 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1410358 |
End bp | 1411047 |
Gene Length | 690 bp |
Protein Length | 229 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637737775 |
Product | ABC transporter, ATPase subunit |
Protein accession | YP_343304 |
Protein GI | 77164779 |
COG category | [V] Defense mechanisms |
COG ID | [COG1136] ABC-type antimicrobial peptide transport system, ATPase component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 39 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGCCGG TACTAGAACT CCTCAGCCTT AGTAAGTCTT ACTGGGAAAG TGAAACCGAG CACCGGGTGC TCCATAATCT CACCGCCACG ATCCAAAAGG GTGAATGTAT AGTACTGCTC GGGCGTAGTG GCTCAGGCAA ATCCACCCTC CTTAACCTCA TTGCGGGTAT CGATTTCCCG AGTGCCGGCG AGGTGAACAT CAATGGGATA TCCTTGACTC AGCTCTCCGA GGAAGATCGC ACCCTGCTGC GCCGGCGTTA TATTGGCTTT ATTTTTCAGT TCTTCAATCT TATTCCCACG CTTACCGTAG AGGAAAATTT GTTGCTGCCC CTAGAACTTA ACGGCCGCAA TAATCCCACT GAACACGCTC ACGCTCAGAG TTTGCTCCAG GAAGTTGGCC TACTGGAACG TGCCCATAGC TTTCCTGATG AACTCTCTGG GGGCGAGCAA CAGCGCGTTG CCATTGCCCG CGCCCTGGTC CACGATCCCT TGCTGGTGCT GGCCGATGAA CCAACAGGAA ACCTGGATCT GGAAACCGGC CGCCGGGTTC TGGCTCTCCT AGACCGCCTG ACCAAACAAC AGGGTAAAAC CCTCATCATG GTCACTCATA GCCCAGAAGT AGTTGGACAA GCAGACCGCA TCCTGCGGCT ACGTCCCGAG GGGTTGGTCG CCGAGGAACT CCCCCAATGA
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Protein sequence | MTPVLELLSL SKSYWESETE HRVLHNLTAT IQKGECIVLL GRSGSGKSTL LNLIAGIDFP SAGEVNINGI SLTQLSEEDR TLLRRRYIGF IFQFFNLIPT LTVEENLLLP LELNGRNNPT EHAHAQSLLQ EVGLLERAHS FPDELSGGEQ QRVAIARALV HDPLLVLADE PTGNLDLETG RRVLALLDRL TKQQGKTLIM VTHSPEVVGQ ADRILRLRPE GLVAEELPQ
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