Gene Noc_1246 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1246 
Symbol 
ID3706397 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1366095 
End bp1366739 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content46% 
IMG OID637737748 
Productcytochrome/quinol oxidase subunit 3 
Protein accessionYP_343277 
Protein GI77164752 
COG category[C] Energy production and conversion 
COG ID[COG1845] Heme/copper-type cytochrome/quinol oxidase, subunit 3 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGCGACA AGCACACTGC TGTAGCAGAG CAATTTGATG ATCCGGAGCA AGAATACCAT 
GCAGCCACCC TCGGCATGTG GGTGTTCCTT GCAACTGAAG TCCTTTTTTT TGGCGTTTTG 
TTTGCTAGCT ATGCGGTCAG CCGGTTTAAT TATCCTGAAG CGTTTGCGGA AGCGAGCAGA 
CACACGGATA TCGTGCTCGG CACTATCAGC ACTGGTGTGT TGTTAACGAG CGGTTTTACC 
ATGGCGCTTG CGGTCCGCAG CGCAAAGTTG GGAAGAGATA AAGCAATCAT AGGTTTCCTG 
GTTTTGACCA TACTGCTGGC AATAGCGTTT CTTTTTATTG AAGGGACAGA GTATTACCAA 
GCCTATGGAG AGCAGCTTAT TCCGGCCTTT AATTTTATGT ATGAAGGCGC CCATGAAAAA 
CCAGTAGAGC TTTTCTTCTT TCTTTATTTT TTGATGACGG GGATGCATGC CGTACATGTT 
ACGATTGGCA TTCTTATAAT GGCGGCTATC GCCATCATGG CTGGACGCAG GCGGTTTACT 
AGTTATTATT ATACGCCGGT TGAACTTACA GGGTTATATT GGGCCTTTGT GGATATTGTT 
TGGATTTTTC TTTATCCACT TTTCTATTTG GTAGCGCGGA CGTGA
 
Protein sequence
MSDKHTAVAE QFDDPEQEYH AATLGMWVFL ATEVLFFGVL FASYAVSRFN YPEAFAEASR 
HTDIVLGTIS TGVLLTSGFT MALAVRSAKL GRDKAIIGFL VLTILLAIAF LFIEGTEYYQ 
AYGEQLIPAF NFMYEGAHEK PVELFFFLYF LMTGMHAVHV TIGILIMAAI AIMAGRRRFT 
SYYYTPVELT GLYWAFVDIV WIFLYPLFYL VART