Gene Noc_1237 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1237 
Symbol 
ID3706388 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1355880 
End bp1356524 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content48% 
IMG OID637737739 
Productchaperone protein HtpG 
Protein accessionYP_343268 
Protein GI77164743 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.250059 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCCCAAA TTTTTTCTTC TCGTTTCGTC CTCTTTCTTA AGCTCGCTAT TGTGGGTATG 
GTTTTGTTTC TTTTGGGGGC GGTAGTGCTT TGGCGCATTG TGACTAGTCC CCTGGCTTCC 
GTGGGTGCGG CCATCGAGCA GCCCGTTCCG TTCAGCCATA AGCACCATGT TAGCGATGAT 
GGCATTGATT GCCGCTACTG CCATACCTCT GTGGAAAAAT CTTCTTTTGC GGGAATCCCT 
TCAACAGAAA TCTGTATGAC CTGTCATTCG CAACTCTTTA CGGATGCGGA AGTGCTGGCT 
CCGGTGAGAG CCAGTTTCCG GGCGAAAAAA CCGTTGCGGT GGAAACGCGT CAATGATTTG 
CCTGATTTTG TTTATTTTAA TCACAGCATT CATATTCATA AGGGGATTGG CTGTGTTTCC 
TGTCATGGGC CAGTGGATGA AATGCCACTT ACCTGGCGGG CAAAGCCTTT AACCATGCAG 
TGGTGTTTAA ATTGTCATCG GGCGCCAGAA CGTTTTGTGC GGCCCCGCGA GTATGTCTTC 
GACATGAATT GGAAGCCGAA AGAAGAGCAA TTGGTGCTAG GGAAGCGGTT AGTAGAAAAA 
TATAATATTC AAAGCAAAAC TGATTGTTCG ACGTGTCACC GCTGA
 
Protein sequence
MPQIFSSRFV LFLKLAIVGM VLFLLGAVVL WRIVTSPLAS VGAAIEQPVP FSHKHHVSDD 
GIDCRYCHTS VEKSSFAGIP STEICMTCHS QLFTDAEVLA PVRASFRAKK PLRWKRVNDL 
PDFVYFNHSI HIHKGIGCVS CHGPVDEMPL TWRAKPLTMQ WCLNCHRAPE RFVRPREYVF 
DMNWKPKEEQ LVLGKRLVEK YNIQSKTDCS TCHR