Gene Noc_1232 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1232 
Symbol 
ID3706383 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1347993 
End bp1351106 
Gene Length3114 bp 
Protein Length1037 aa 
Translation table11 
GC content44% 
IMG OID637737734 
Productglycosyl transferase family protein 
Protein accessionYP_343263 
Protein GI77164738 
COG category[H] Coenzyme transport and metabolism
[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0463] Glycosyltransferases involved in cell wall biogenesis
[COG2227] 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGGACA GCTCATCGGT CGTATTTTTG CTAGGAGTGC CCCGTTCAGG TACAACTTTA 
CTTTCTTGGT TGCTTAATCA GCACCGGAGT ATTTACTGCC CGCCGGAGCC GTGGCTGCTG
CTGGGACTAG AATCGCTTGG ACAGGTTCCT GCTGATCACG TTGCCGATCC GCCTCTTTTG
TCTAGCGCGG TTGCTGAGTT TTTAGGAGCT AGACGATTAC AGAGTCTCAA GCGGGCAGCC
TTATCTATTT ATCAGCACGC CTTGGAGGAA GCGGGAAAAT CTGTTTTTAT TGATAAAACC
CCTCGTAACT ATCATGCCCT TGATTTTGTG CAGGAGTTTC TGCCGGAAGG AAAAATTATT
TTTCTCGTAC GCAATCCCCT TGATGTGGCG GCTTCTTTTA AAACTTCTTG GTCGGTGGAA
CTTCCAAAAA TTATCTCTAA TCAGGAAGAT ACTCCTTTTA TTTTTGACTA TATTCTAGGT
TTTAATAGAC TGCTGGATTT TGAAGAAAAT TATCCCGTGC TTAGAGTTCG TTATGAGGAC
TTGGTTGTTG ATCCTGATGA ACAAATGGTG CGTATCTTTA AGTATCTAAA ACTCCCACCG
CAAGCAATTA ATAAGGATTT GGACATTCAA AAAACCTCCT ATGCCAGGAG TTCTCTCGGC
GATAAGAGAA TTCTTGCGAC GCCCTCTATT CATACGCGAT CTATTGATGC TTATAAGGGT
GTTTTCAAAA AAGGGGAAAT TCAAACTCTT TTGAATTCCT TGGGAGAAAA ATCTTTTTTT
AAATTAGGTT ATGCCCAACA ATATGCTGAT GCCTGTGCAG AATTCGAAAT AATGCCTTGT
CACGAGATCT CTTCACGGCT GCTAAAAACA GCGGAAGGAT ACGTGCAACG ACGCCAGAGG
CGTTGTTCTG ACCTCCAGTC ACGAGGTATT TTCGAGCAAA AAATAGAATA TTTAAGTCAA
CAAATTGAAT GCTTGAAGCA ACAAAATGAA ATTGCCCAGA AGCGCAATCA GGATATTAGT
AATGAATTAA AATCCGCTCA GAGGCAAAAT AGCACGCTTA ATAAGCAGTT AATTCTATCG
AGAACAGAAA AGGAAGAATT TAAGAAGCAA TTCCATTCGT TGCAAAATAT GGGTTTGAAA
GCGCGTTTAC ATGGGGATCT TGGATATATT AAAAAACGCT TAAAACAGAA AATCAAAGAT
GGCCTTTGGC ACGTAGTACA AGGGCCGCCC GCACCGCCAT TACCAAGAAT AACGATAGTT
ACGCCGGTGC TTAATGGCGC TCAATTTATT GAAGCGACGC TGCGCTCGGT GCTGGTACAA
GAATATCCCG CACTGGAATT TATCATCGTT GATGGTGGTT CCACTGATGA TACCTTGTCT
ATTATAGATA GCGTTCAAAA TAGTTCTGAT TTTAAGGATA GAATTAGTTG TGTCATATCA
GAGCCTGATG GCGGCATGTA TGATGCTATC GCTAAGGGCT TCTCGCGGGC AACGGGTGAA
ATACTGGGAT ACCTAAATGC TGATGATTTA CTTGAAGGCG GGGCCTTAGC TGCTGTTGGC
AGTTATTTCT CCCGCCATCC GAAAGTAGCC GTAATCTACC ATGAGGACAC TGTTTTGGTG
AACGGGTGGA AATATCCCAA CGTTCGGCAG CCAAAGGGGA TAAATACGGT TGATCTGCTT
AATAAGCATA TTTTATTTCA GGACGGTGTT TTTTTTAGGC GGGAAGCTTA CCAAACCATT
GGTGGTTTAC GGCGTGATTT AAAATTAGCG GGAGATTATG ATCTCTGGTT GCGTTTATCG
GCTCGTTTTA AATTTATCCG TAGGTCAGGG CATGTTAGTT GTTTCCGTAT TCGCCGGGGG
CAATTTAGCG AAAATATGGA AGCTTATAAT GAAGAAATGG AACGTGCGCG CCATGATTTT
TTATCCCAAG CTTCCCGCTT GCAAATACTT CGCTGGGAAA TTCAAAAGAA ATATCTTTTT
TTCAGTAAAT CTATAGAAAA AATTTCGAGG CGCCACCGCT TATTTTTCCC CCTCGATTTT
AGCAATTTGC CGCCACCGCC TGTTAGTTTG TCTGGAACGG AGTATGGACA GGCATTAAGC
CCCATTGATG GCAAGTTGGC AGAGCGGTTC TTGTTTAGTA CTCCAGATAC TCGCTTTGGC
GATAAGATGA TCAATTATAT CTACCTGGAT ACCCGTCATC TCATTGCGAT TACTTATCCG
CCTATCCAGC CTGCTGAACT TGACAGATTG TATAAGCGCC ATTATTCTGC GCCGCCCTCA
TCGATCAATA ACCCAGAGAG TCCTTCGCCC TATCGTCAGT TCGAGGGTAA ACGCCCCTGG
GAGAAATTGC TTCTGAGGCT ACCCGTGGAG CGGTGGCTTT CGTATTTTTT TTCCAAAGAT
CTCTGGCTAG ATAATACCCT GAATGAGTTG AGTAATACGC TTCAATCTTC ACAAATTAAT
ATTCACAGCC CACTTCGAGT ACTTGATACT GGTTGTTTTG AGGGCCATTT ACTCGATGGC
ATTGCCGCCC GGAAATCCTG GCGAGGTTAT GGCCTGGAAC CCAATATCCA AGCGGTGGAA
ATTGCTCGTG GTAAGGGGCA TTGTGTTTGG CAAGGACGTG CTGAAGATGC TGTTGAGATT
ATTCCATATT CCTATCAGTT CGATGTCATT TTCATGGGGC AAAGTATTGA GCATACAGAT
GATCCGGTGC GGGTCCTGCG CCGTCTTCGT CTGCTACTTG CCCCTGGTGG CGTTCTGGTC
GTGAGTACGC CTAATTTGGA TTCCCGGCAA ATTACCTGGT TTGGCCCAAC TTGGGCTCAT
TGGCATGCAC CCTATCATCG CTATATTTTT TCGAGGAAGG GTTTATTCGC CCTAGCCAGA
CAAACAGGTT TGCATCCTGT TTGTTTCAAA ACCTTCTCCC ATTGTTACTG GACTGCCATG
TCACTAATGC AGAATTTTAT CGGGCTTGGA GGTAGCGTAT CCCATACAGT CGATTTTGAT
CATCCCCTGC GTTTACGGGC GCAAAGAATT AATTTTTGGC AGCAGTTTTT TTGGAATCGT
ATAGGCAAAG GGGATTATTG CTTCTTTGTG ATGAGGGATG AGGAAAGTGG CTAA
 
Protein sequence
MTDSSSVVFL LGVPRSGTTL LSWLLNQHRS IYCPPEPWLL LGLESLGQVP ADHVADPPLL 
SSAVAEFLGA RRLQSLKRAA LSIYQHALEE AGKSVFIDKT PRNYHALDFV QEFLPEGKII
FLVRNPLDVA ASFKTSWSVE LPKIISNQED TPFIFDYILG FNRLLDFEEN YPVLRVRYED
LVVDPDEQMV RIFKYLKLPP QAINKDLDIQ KTSYARSSLG DKRILATPSI HTRSIDAYKG
VFKKGEIQTL LNSLGEKSFF KLGYAQQYAD ACAEFEIMPC HEISSRLLKT AEGYVQRRQR
RCSDLQSRGI FEQKIEYLSQ QIECLKQQNE IAQKRNQDIS NELKSAQRQN STLNKQLILS
RTEKEEFKKQ FHSLQNMGLK ARLHGDLGYI KKRLKQKIKD GLWHVVQGPP APPLPRITIV
TPVLNGAQFI EATLRSVLVQ EYPALEFIIV DGGSTDDTLS IIDSVQNSSD FKDRISCVIS
EPDGGMYDAI AKGFSRATGE ILGYLNADDL LEGGALAAVG SYFSRHPKVA VIYHEDTVLV
NGWKYPNVRQ PKGINTVDLL NKHILFQDGV FFRREAYQTI GGLRRDLKLA GDYDLWLRLS
ARFKFIRRSG HVSCFRIRRG QFSENMEAYN EEMERARHDF LSQASRLQIL RWEIQKKYLF
FSKSIEKISR RHRLFFPLDF SNLPPPPVSL SGTEYGQALS PIDGKLAERF LFSTPDTRFG
DKMINYIYLD TRHLIAITYP PIQPAELDRL YKRHYSAPPS SINNPESPSP YRQFEGKRPW
EKLLLRLPVE RWLSYFFSKD LWLDNTLNEL SNTLQSSQIN IHSPLRVLDT GCFEGHLLDG
IAARKSWRGY GLEPNIQAVE IARGKGHCVW QGRAEDAVEI IPYSYQFDVI FMGQSIEHTD
DPVRVLRRLR LLLAPGGVLV VSTPNLDSRQ ITWFGPTWAH WHAPYHRYIF SRKGLFALAR
QTGLHPVCFK TFSHCYWTAM SLMQNFIGLG GSVSHTVDFD HPLRLRAQRI NFWQQFFWNR
IGKGDYCFFV MRDEESG