Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1219 |
Symbol | |
ID | 3706409 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1334133 |
End bp | 1334810 |
Gene Length | 678 bp |
Protein Length | 225 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637737721 |
Product | peptidylprolyl isomerase |
Protein accession | YP_343250 |
Protein GI | 77164725 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0545] FKBP-type peptidyl-prolyl cis-trans isomerases 1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCCTAAAG GAGCCATGTT TCTAATTGCT AGCTTCACCC TAGCCCTCCT TGGAGGAACC ACCACTGCGG AGGAGCTCGA AACAGATGCC CAGAAACTGA GTTACCTTAT CGGGTATCAA TTTGGCCAAA ATATGCAGCA GCAACGAATA GAACTGGATA AGCAGGCATT TATGCTTGCC CTTGAAGATG CGTTGCAACA AGCCCCCTCG CGCCTTTCCC CGGAACAAGC CAAGGCGGCA ATGAACGCCA TACAACAACA AGAGCAGCAA AAGAGAGCCG AAAGTGGAGA GAAAAATAAA GCTACAGGAA AAGATTTTCT AAAAACCAAC AAAGAAAAGG AAGGAGTGGT CGAGCTTCCC AACGGGCTGC AATATCGCAT TCTTGAGCAA GGCGAAGGCG AAAAACCCGC TGCCGAGGAT ACCGTCGTAG TCAACTACCG GGGCACCCTG GTGGATGGCA CGGTATTCGA CAGTTCCTAT GAACGAGGGG AACCGGTTAC CTTTAAGGTC AATGGCGTTA TTGAAGGTTG GCAACAGGCG CTGCAGTTAA TGCCCGTGGG TTCTAAGTGG AAAGTCTTCA TCCCTTCCGA CCTTGCCTAT GGCGAGCGGG GCGCTGGCCG TCTCATCGGT CCCAATGAAA CGCTCATTTT TGATATTGAA CTGCTCGAAA TTAAATAA
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Protein sequence | MPKGAMFLIA SFTLALLGGT TTAEELETDA QKLSYLIGYQ FGQNMQQQRI ELDKQAFMLA LEDALQQAPS RLSPEQAKAA MNAIQQQEQQ KRAESGEKNK ATGKDFLKTN KEKEGVVELP NGLQYRILEQ GEGEKPAAED TVVVNYRGTL VDGTVFDSSY ERGEPVTFKV NGVIEGWQQA LQLMPVGSKW KVFIPSDLAY GERGAGRLIG PNETLIFDIE LLEIK
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