| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1216 |
|---|
| Symbol | |
|---|
| ID | 3706406 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 1329485 |
|---|
| End bp | 1331623 |
|---|
| Gene Length | 2139 bp |
|---|
| Protein Length | 712 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 637737718 |
|---|
| Product | ATP-dependent DNA helicase RecG |
|---|
| Protein accession | YP_343247 |
|---|
| Protein GI | 77164722 |
|---|
| COG category | [K] Transcription
[L] Replication, recombination and repair |
|---|
| COG ID | [COG1200] RecG-like helicase |
|---|
| TIGRFAM ID | [TIGR00643] ATP-dependent DNA helicase RecG |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 0.999568 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCCATTGT CCATCTTGAC GAGTGAAAAA CCCTGCTCTC TTGAGAGTCG GGGTAACCCC
AACCCCCTAG CTTTAGATAC TCCAGTCACC GCGCTCAAGG GCGTGGGCCC TAGCCTAGCT
AATCGGTTAG CTAGGCTAGG GCTTTGTAAA GTCCAGGATT TGCTCTTTCA TCTCCCTCAG
CGTTACCAGG ACCGTACCCG GGTAGCCCCC ATTGGCACTT TACAAAAAGG CAGGGAGGCA
TTGATCGAGG GGGAAATTCA GTTGTGTGAA CTTCGTCCAG GACGCCGCCG GTCCTTGCTC
TGTTCTTTAA GTGATGGAAC AGGACAGATC TTTCTGCGTT TTTTCCATTT CTCGGCCTGG
CAGCAAAACT CATTAACCCC GGGAGCGCGG GTATGCTGCT TTGGTGAACT ACGCCAGGGC
GCCGCGGGTC TAGAGATGGT TCATCCCGAC TATCGCTGCC TCCCGGAGGA TAGGCCAACC
GTCACTGAGA CCTATCTGAC CCCTGTCTAT CCTGCTACAG AAGGGTTACG CCAATCCAGT
TTGAGGGATC TTATCCAAGG AGTGTTTAAA GATCTGGGCG AGGAGGGAAT CATTGATTAT
TTACCGTCAG GGCTTCTAGA AGGGGTTGGT TTGCCGACGC TGAACGAGGC GCTTATTTAT
CTCCATCAGC CGCCGCCCGA TGCTCCCTTA AATTTGCTTG CCGAGGGGAA ACACCCTGCA
CAACAGCGGC TGGCTTTTGA AGAATTGCTG GCGCACCATT TGAGTCTACG GCAATTGCAT
TTACGGGCCT CCCGCCTCCA GGCGCCCCTT CTCTCCAGCG AAGGGCAGTT GCAACAACGC
TTTTTGGCTA CACTTCCCTT TCCGTTGACG GCGGCCCAGA GCCAGGTCGT CCAGGAAATC
CTGGCGGATA TGGCCCAGGA ATCGCCCATG CAGCGCCTAC TTCAGGGCGA TGTGGGTTCC
GGTAAAACGG TAGTAGCCGC CCTGGCTATT TTGCAGGCGG TTGAGGCTGG ATACCAAGCG
GTGCTGATGG CCCCCACCGA ATTACTGGCG GAGCAGCATC TACGCGTCTT ACAAGGCTGG
TTTTGTCCTT TTGAGATTAG GGTGGAATGG CTGACTGCGA AAAGGACTAC AAAAGCCCGG
CGGGAAAGTT TGGAACGGCT CGAAGGGGGA GAAACACCCG TTGCGGTGGG TACCCACGCG
CTATTCCAGG AGGGTGTCAA CTTTCATAAG TTAGGCTTAG TGGTGGTTGA TGAACAACAC
CGTTTTGGCG TTGAGCAGCG TTTGGCGCTG CGGGAGAAGG GGCGCTATGG TAATTGCTGC
CCTCATCAAT TGATTATGAC TGCCACGCCT ATCCCCCGTA CCTTGGCCAT GACGGCCTAT
GCTGATCTGG ACACTTCGGT GATTGACCAA TTACCCCCTG GACGTATTCC CGTTGCTACC
GCGGTAGCCT CAGATCGCCG CCGCGACGAG GTGGTGGCCA GGGTGCGCCG GGCCTGCAGG
GAAGGGAGAC AAGCTTATTG GGTTTGTACC CTGATTGAGG AATCCGATAG TTTACAGGCG
CAGGCTGCGG AGGAATCGGC GGCGGAGCTT GCTGAGGCAC TGCCTGAATT ATGCATTGGA
CTTATTCATG GCAGGATGAA GACGCAGGAG AAAGAGCGCG CCATGGCTGC CTTTAAATCA
GGCGATTTTC ATCTTTTGGT AGCGACTACG GTAATTGAGG TGGGGGTGGA TGTCCCGAAC
GCCAGTTTGA TGATCATCGA GAATGCCGAG CGCCTGGGGC TTTCTCAACT GCACCAGCTG
CGGGGGCGGG TTGGCCGCGG TGCGGCGGAT AGCTATTGTG TACTGTTGTA TCATGGGCCG
TTATCCGAGC TGAGCCGGGC GCGGTTAGCT TGCTTGCGGG CCACTAACGA TGGCTTTGAG
ATTGCACGCC GCGATCTTGA GCTTCGCGGT CCTGGCGAGG TACTAGGAAC CCGCCAAACG
GGTTTGCCCC AATATCGGGT GGCTAATCTT ATGCGGGACC AGGAGCTATT GGTAAGTGTG
GGGCAGGTAG CAGACCGATT TCAGCAGCGC TATCCTGCGC AAGTAGCTTC CTTAATCCGC
CGTTGGCTGG GGGAAGAAAG CCGGTATGGG GAAGTGTAG
|
|---|
| Protein sequence | MPLSILTSEK PCSLESRGNP NPLALDTPVT ALKGVGPSLA NRLARLGLCK VQDLLFHLPQ
RYQDRTRVAP IGTLQKGREA LIEGEIQLCE LRPGRRRSLL CSLSDGTGQI FLRFFHFSAW
QQNSLTPGAR VCCFGELRQG AAGLEMVHPD YRCLPEDRPT VTETYLTPVY PATEGLRQSS
LRDLIQGVFK DLGEEGIIDY LPSGLLEGVG LPTLNEALIY LHQPPPDAPL NLLAEGKHPA
QQRLAFEELL AHHLSLRQLH LRASRLQAPL LSSEGQLQQR FLATLPFPLT AAQSQVVQEI
LADMAQESPM QRLLQGDVGS GKTVVAALAI LQAVEAGYQA VLMAPTELLA EQHLRVLQGW
FCPFEIRVEW LTAKRTTKAR RESLERLEGG ETPVAVGTHA LFQEGVNFHK LGLVVVDEQH
RFGVEQRLAL REKGRYGNCC PHQLIMTATP IPRTLAMTAY ADLDTSVIDQ LPPGRIPVAT
AVASDRRRDE VVARVRRACR EGRQAYWVCT LIEESDSLQA QAAEESAAEL AEALPELCIG
LIHGRMKTQE KERAMAAFKS GDFHLLVATT VIEVGVDVPN ASLMIIENAE RLGLSQLHQL
RGRVGRGAAD SYCVLLYHGP LSELSRARLA CLRATNDGFE IARRDLELRG PGEVLGTRQT
GLPQYRVANL MRDQELLVSV GQVADRFQQR YPAQVASLIR RWLGEESRYG EV
|
|---|
| |