Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1175 |
Symbol | |
ID | 3706749 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1284469 |
End bp | 1286238 |
Gene Length | 1770 bp |
Protein Length | 589 aa |
Translation table | 11 |
GC content | 52% |
IMG OID | 637737679 |
Product | TrkA-C, di- and tricarboxylate transporters |
Protein accession | YP_343208 |
Protein GI | 77164683 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0471] Di- and tricarboxylate transporters |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCCTG AAGCGTGGCT GACCCTAGGC GTTATCGTCC TTATCCTGGG ACTATTAATA TTCACCCGCA AACCTCCTGA CGTTATTGTG GTCGGTGGAG TAACCTTGCT GTTATTCAGT GGCGTGCTTA CCCCTGAAGA AGCATTAGCC GGTCTATCCA ATCCCGCAAT GGCGACGGTA GGGGTATTAT TTATCGTCGC CGTGGGCCTG CGTGAAACCG GCAGTATCGA TTGGCTGGCT CACCACCTAT TGGGCAATGG ACGTTCGTTA GTTCGGCTGC AAGCCCGGAT TATGGGGCCC ACCGTTGCCA TAAGCGCTTT TATGAACAAT ACCCCCGTGG TGGCCATGCT CATCCCAGCC ATCACCGATT TTGCCCGCCG GCATCGTCTC TCCACCTCAA AACTAATGAT TCCCCTAAGT TATGCGGCTA TTTTAGGAGG AACTTGCACC CTCATCGGCA CCAGTACTAA TTTAGTCGTT AATAGCCTGT TAATCGAGCA AACCGGGCAG GCAGAACTAG GCTTATTTGC CATTGCTTGG GTGGGACTGC CCGTTGCAAT AATAGGAATT ATTTATGTAC TCCTATTCGG ACGTTGGCTA CTCCCTGATC GGAAGCCCGT CTTCAGCCAC TGGAACGATC CGCGGGAATA TACCCTAGAA ATGCTGCTCC AGCCCAACAG CCCCCTCGTG GGGCGGACGA TTGAGGACGC GGGCCTACGT AATTTGCCGG GCATGTACCT CGTCGAAATC AACCGTCAAA ATCAGATAAT CCCAGCAGTA CGGCCCAACG AGAAGCTCCA GCCCCATGAT CGATTAGTCT TTGTGGGAAT TATTGATACG GTCAAAGATC TACAAAAGAT TCGCGGGTTA ATGCCCGCAA CTGAGCAGGT GTTCAAACTC GATTCACCCC GTGCCGAACG CTGCCTGATT GAGGCGGTAG TGTCCAATAC CTGCCGCTTG ATTGGAACCA CTATCCGCGC AGGCCAATTC CGCAGTGTCT ATAATGCAGT CGTCATTGCC GCGGCTCGTA ATGGGGAAAG AATAAGAGGC AAGATTGGCG ATATCATCCT GCAGCCTGGG GATACGCTGC TTCTAGAAAC TCGCCCTTCC TTTTTAGAGC AGCAACGCAA CTCACGGGAT TTTTTCCTAG TCAGTGAAGT TGCCGACTCC AACCCGCCCC GTCATGACCG GGCCTGGATA GCCCTTATCG TCCTGGCACT TATGGTAATA GTCGTTACTT TACAATGGCT TAGCTTGCTA GAGGCCGCTC TTACCGCCGC CGGCCTCATG CTTGCAACGG GCTGCCTTCA AATCGCAACC GCACGCCGCA GCGTAGATTG GCAGGTGCTT ATCGTCATCG CAGCCTCCCT TGCCCTTGGC CAAGCATTGC AAAATACCGG CGCCGCTGCA CATATTGCTC ATATCGTACT AAAACTTATT GGCGATAACC CGTGGGGAGT GCTTGCCGCA GTGCATTTTC TCACCGCCCT CATGACGGAA CTCATCACCA ACAATGCCGC CGCCGTACTC ATGTTCCCTA TTGCCTTGGC GGCCGCCGAT AGCCTTGGGG TTAATTTCAC GCCCTTTGCC ATTTCCATCA TGGTCGCTGC CTCGGCCAGC TTTGCAACCC CGATAGGCTA TCAAACTAAT TTAATGGTGT ATGGCCCTGG CGGCTATCAT TTTACCGATT ACCTTCGTAT CGGCCTTCCT CTTAATTTCT TAGTATGGAG TATGACCGTT TTTATCGCTC CCCAAATATG GTCATTTTAA
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Protein sequence | MSPEAWLTLG VIVLILGLLI FTRKPPDVIV VGGVTLLLFS GVLTPEEALA GLSNPAMATV GVLFIVAVGL RETGSIDWLA HHLLGNGRSL VRLQARIMGP TVAISAFMNN TPVVAMLIPA ITDFARRHRL STSKLMIPLS YAAILGGTCT LIGTSTNLVV NSLLIEQTGQ AELGLFAIAW VGLPVAIIGI IYVLLFGRWL LPDRKPVFSH WNDPREYTLE MLLQPNSPLV GRTIEDAGLR NLPGMYLVEI NRQNQIIPAV RPNEKLQPHD RLVFVGIIDT VKDLQKIRGL MPATEQVFKL DSPRAERCLI EAVVSNTCRL IGTTIRAGQF RSVYNAVVIA AARNGERIRG KIGDIILQPG DTLLLETRPS FLEQQRNSRD FFLVSEVADS NPPRHDRAWI ALIVLALMVI VVTLQWLSLL EAALTAAGLM LATGCLQIAT ARRSVDWQVL IVIAASLALG QALQNTGAAA HIAHIVLKLI GDNPWGVLAA VHFLTALMTE LITNNAAAVL MFPIALAAAD SLGVNFTPFA ISIMVAASAS FATPIGYQTN LMVYGPGGYH FTDYLRIGLP LNFLVWSMTV FIAPQIWSF
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