| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_1173 |
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| Symbol | |
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| ID | 3706825 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1281996 |
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| End bp | 1283543 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 637737677 |
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| Product | electron transport complex protein RnfC |
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| Protein accession | YP_343206 |
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| Protein GI | 77164681 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG4656] Predicted NADH:ubiquinone oxidoreductase, subunit RnfC |
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| TIGRFAM ID | [TIGR01945] electron transport complex, RnfABCDGE type, C subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 23 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAACTC GCCGGCTATG GTCATTCTCC GGTGGCCTGA AACTTCCTGG CCATAAAAAC
CCCTCCACGC CAATGCCCAT CGTTCAGGCC GCCCTGCCAA AACGACTGGT ACTGCCTCTG
CAACAGCACA TTGGTGAAGC GGCGGAACCT ATGGTTAGCA TTGGTGATCA GGTACTGAAG
GGTCAAGTGA TCGCCACGGC TCAAGGCTAT CTCAGCGCCC CGGTACATGC TTCCAGCTCC
GGCCAAGTAG TAGCGTTAGA GAACCGGCCA ATTCCCCATC CTTCCGGTCT CAGCGCTCCT
TGCATTGTCA TCGAAACCGA TGGCAAGGAC GCCTGGGGCG AACGCCATCC GGTGGAAAAC
TATCGACAGA TTGATCCTAG CCATCTACGT AACCTGATTC GCCAGGCGGG GATCGTGGGA
CTGGGGGGGG CTGGTTTTCC CACCTTTATC AAGCTCAATC CCGGTCCCCA ACCCAAGGTC
AAGACATTAA TTCTCAACGG CGCCGAGTGT GAGCCTTATA TCACCTGCGA TGAAGCGCTT
ATGCGGGAGC GGGCCGAGGA GATTATCCAG GGGGCCGCCA TCATGGCTCA TGCCCTCAAT
GCCTACCATT GCCTGATTGG CATTGAGGAC GATAAACCTG AAGCCTGTAC AGTTCTTGCT
GCCGCTGCGG CCGAGGGGAT CGAGGTGGTG CCGATTCCAA CCCGCTACCC CGCCGGAGGC
GAGAAACAGC TCATTAAGGT TTTGACTGGG CAGGAAGTCC CCAGCAATGG CCTGCCTATT
GATATCGGCG TCGTTTGCCA CAACGTAGGC ACCGCGGCGG CTGTTTACCG GGCTATTCAC
CGGGGTGAAC CCCTTCTCTC CCGGATCATG ACCGTGGCCG GCAAGGCTGT GGCCCACCCC
GGTAATTTAG AAGTTTTGCT GGGCACGCCC ATTCGCCATC TATTAGCGCA ACAAGGTGCG
AATATTCAAA GCATTGACCG CCTCATCATG GGCGGCCCCA TGATGGGTTT TACTCTCCAC
GATGACGGGG CGCCAGTTAT CAAAACTACC AACTGCCTAT TAGCGGGGCT CCATGAAGAC
ACCCGGCAAC CCCCGGCCAT GCCTTGTATT CGCTGCGGTG CTTGCGTGGA AGCCTGTCCT
GTAGGACTGC TTCCCCAACA ACTCTATTGG CATGCCCGAG CCAAAGAGTT AGATAAAACC
CAAGACTATC ACCTTTTTGA TTGCATTGAA TGCGGTTGCT GCGCCTACGT CTGTCCTAGC
CACATTCCCT TGGTCCAGTA TTACCGTTAT GCTAAAAGCG AGATCTGGAC CCAGGAACAA
GAGCGAGAAA AGGCCGACCT GGCCCGCCAG CGCCATGAAT TCCGGCAGCA ACGGCTAGCA
CGGGAGCAGC AACAAAAAGC GGCCCGGCAA CGAGCCAGAA AGGCCCCTGT CACTCCCTCG
GCCAGCAAGG CGGAGAAGCA GGCTGCCATT CAAGCGGCGG TAGAGCGATC CCAGGCTAAA
CGCGCCGCCC AAAAAACGGC GGAAGACGAA CCCTTTTCTT CACCATAG
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| Protein sequence | MKTRRLWSFS GGLKLPGHKN PSTPMPIVQA ALPKRLVLPL QQHIGEAAEP MVSIGDQVLK
GQVIATAQGY LSAPVHASSS GQVVALENRP IPHPSGLSAP CIVIETDGKD AWGERHPVEN
YRQIDPSHLR NLIRQAGIVG LGGAGFPTFI KLNPGPQPKV KTLILNGAEC EPYITCDEAL
MRERAEEIIQ GAAIMAHALN AYHCLIGIED DKPEACTVLA AAAAEGIEVV PIPTRYPAGG
EKQLIKVLTG QEVPSNGLPI DIGVVCHNVG TAAAVYRAIH RGEPLLSRIM TVAGKAVAHP
GNLEVLLGTP IRHLLAQQGA NIQSIDRLIM GGPMMGFTLH DDGAPVIKTT NCLLAGLHED
TRQPPAMPCI RCGACVEACP VGLLPQQLYW HARAKELDKT QDYHLFDCIE CGCCAYVCPS
HIPLVQYYRY AKSEIWTQEQ EREKADLARQ RHEFRQQRLA REQQQKAARQ RARKAPVTPS
ASKAEKQAAI QAAVERSQAK RAAQKTAEDE PFSSP
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