Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1151 |
Symbol | |
ID | 3706916 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1258904 |
End bp | 1260103 |
Gene Length | 1200 bp |
Protein Length | 399 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637737655 |
Product | O-succinylhomoserine sulfhydrylase |
Protein accession | YP_343185 |
Protein GI | 77164660 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases |
TIGRFAM ID | [TIGR01325] O-succinylhomoserine sulfhydrylase |
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Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTAACCA ATGATCAAAG CAAGTACGAT TTTGCTACGC TGGCAGTGCG AGCGGGGCAG CAACGTACTG GTGAGGGTGA ACATGCCGAG CCTATATTTC CTACTTCCAG CTTTGTGTTT GAAAGTGCTA CAGAAGCTGC TGCTTGTTTC GCAGGAGAAA TAGCAGGAAA TATTTATTCC CGATTTACTA ACCCTACGGT CCGGACTTTT GAGCAACGCC TTGCAGCTTT AGAAGGGGGT GAGCGTTGCG TGGCGACTTC ATCGGGGATG GCGGCTATCC TTGCGACTTG TATGGCGCTG TTGAAGGCAG GAGATCATAT CGTTTCCTCG GAGAATATTT TTGGAACGAC GCGGGTTCTC TTCAATAAAT ATCTGGCCCG CTTTGGCGTA GAGACCACCT TTGTTCCTCT CATTCAGTTG GAAGCCTGGG AAAACGCCTT GCGTCCCAAT ACTCGCTTAC TATTTCTGGA AACGCCTTCC AACCCTCTGA ATGAAATAGC AGATATCGTT CAACTATCCA GTCTGGCGCA GGCCCATGGT TGCTTATTAG TGGTGGATAA TTGTTTTTGT ACTCCTGCTT TGCAGCGCCC TTTCGAGCTA GGGGCGGATC TTGTTATTCA CTCTGCCACC AAGTACCTCG ATGGCCAAGG GCGGTGCGTG GGGGGCGCCG TAGTGGGTGA TGGGCAACGG GTAGGAGAGG AAATCTTTGG CTTTTTGCGT ACTGCGGGTC CAACAATGAG TCCCTTCAAT GCCTGGGTTT TTCTTAAAGG TTTAGAAACC TTGCAATTGC GGATGGAAGC GCTGAGTCGA CAGGCTCAGG CTTTGGCCGA ATGGTTGGAA GCGGAGCCAA AAGTTTCAAG GGTATATTAT GCAGGTTTGC CTTCCCATCC TCAACACACG CTGGCCTCGA AGCAACAGTC GGGCTTTGGT GGCCTGGTCG CATTCGAGCT AAAAGGAGGG AAGGCGGCCG CCTGGAAACT TATCGATTCT CTCAAGTTTA TCTCTATTAC TGCTAATCTT GGGGATGTGA AAACCACCAT TACTCACCCG GCTACCACGA CCCATGGTCG TTTAACGGAG GAGGAGCGAT TGGCAGCAGG TATCAGCGAT GGTTTGGTAC GAATCTCCGT GGGTTTAGAG TCCCTTGAGG ATATTAAAAA AGATTTACAG CGGGGTTTGG ATAGGATGGC CCAAGGTTGA
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Protein sequence | MLTNDQSKYD FATLAVRAGQ QRTGEGEHAE PIFPTSSFVF ESATEAAACF AGEIAGNIYS RFTNPTVRTF EQRLAALEGG ERCVATSSGM AAILATCMAL LKAGDHIVSS ENIFGTTRVL FNKYLARFGV ETTFVPLIQL EAWENALRPN TRLLFLETPS NPLNEIADIV QLSSLAQAHG CLLVVDNCFC TPALQRPFEL GADLVIHSAT KYLDGQGRCV GGAVVGDGQR VGEEIFGFLR TAGPTMSPFN AWVFLKGLET LQLRMEALSR QAQALAEWLE AEPKVSRVYY AGLPSHPQHT LASKQQSGFG GLVAFELKGG KAAAWKLIDS LKFISITANL GDVKTTITHP ATTTHGRLTE EERLAAGISD GLVRISVGLE SLEDIKKDLQ RGLDRMAQG
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