Gene Noc_1140 details

Gene Information

• Locus tag: Noc_1140
• Symbol: thrS
• ID: 3706904
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Nitrosococcus oceani ATCC 19707
• Kingdom: Bacteria
• Replicon accession: NC_007484
• Strand: +
• Start bp: 1248285
• End bp: 1250219
• Gene Length: 1935 bp
• Protein Length: 644 aa
• Translation table: 11
• GC content: 51%
• IMG OID: 637737643
• Product: threonyl-tRNA synthetase
• Protein accession: YP_343174
• Protein GI: 77164649
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.000099925
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGCCTGTTA TTACCCTTCC AGATGGTAGC CAACGCAGTT TTGACCATCC TGTTACCGTT 
TATGACGTAG CGGCCGATAT CGGCCCGGGT CTAGCGAAGG CAGCCCTTGG GGGCAAGATC 
GAAGGCCGTT TGGTCGATAG TTCTTATCCC CTTGAGAAGG ATACGAAACT TACCATTATT 
ACCGAACGGG ACATGGATGG CTTGGAAATT ATCCGCCATT CCTGCGCGCA TTTGCTGGCC 
CAAGCGGTCA AGGCGCTTTA TCCGGAAGCC CAAGTGACTA TCGGACCGGT GATTGAGGAT 
GGCTTCTATT ATGATTTTGC CTACCCTAAG GGGTTCACCC CAGAGGATCT TGAAGCCATT 
GAAGCCAAAA TGCGAGAATT GGTGGAGCAA GATCTTTCGG TTCATCGAGA GTTGAAGTCC 
CGCGAGGAAG CTGTCTCTTT ATTCCGCCGG ATGGGGGAAG AATATAAGGC TGAGATTATC 
GCTTCTATCC CCTCGGAGGA GGAAATTTCT CTTTACCGAC AAGGGGATTT TGTGGATCTT 
TGCCGCGGGC CCCATGTGCC TTCGACCGCT AGGCTCAAAG CCTTTAAGCT TACCAAGGTG 
GCCGGCGCTT ATTGGCGGGG TGATGCCAAT AACGAGATGC TGCAGCGTAT TTATGGCACC 
GCCTGGCCTG ATAAAAAAGC CCTTAAGGCT TATCTCCATC GTCTTGAAGA AGCTGAAAAA 
CGGGATCACC GCCGGATTGG CGCTGATTTG GATCTGTTTT CCATTCAGGA AGAAGCGGGT 
GGCGGCTTGG TATTCTGGCA TCCCATGGGG GCGCGTATCC GGCGGGTGAT AGAGGATTTT 
TGGCAGGAGC GTCATACGGC GGCAGGCTAT GAAATGCTCT ATACGCCCCA TATTGCTCAC 
GAGGAATTAT GGCAAACTTC CGGGCATACG GATTTTTACC GAGAGTCCAT GTACCAGCCC 
ATGGAGGACG ACCACCAACT TTACCAGCTT AAGCCCATGA ATTGCCCTTT TCATGTGCTG 
ATATATCAAG GTCGGCTGCG CTCCTATCGG GAATTGCCCA TCCGCTGGGC GGAACTGGGT 
ACCGTTTACC GCCATGAAAT GTCTGGTGCT CTGCATGGGT TGATGCGGGT GCGGGGGTTT 
ACTCAGGATG ACGCGCATAT TTTCTGTCGC GAAGAGCAGA TTGAGAATGA AATTCTGGGT 
ATCCTTGATC TGACTCTAGA AATGCTAGCG GCGTTTGGTT TTGACCGTTA TGAAATTGAC 
CTTTCTACGC GGCCGGAAAA ATCGGTGGGG CCGGAAGCAA TTTGGGAGCA GGCAACCCAA 
GCGTTGCGTT CAGCATTGGA TAAGAAGGGC TTGGATTACG CTGTGGACGA AGGCGGTGGT 
GCTTTCTACG GCCCCAAGAT CGATATTAAA ATCGAGGATG CCATTGGCCG TAAATGGCAG 
TGCTCTACGG TCCAGCTAGA CTTTAATCTG CCGGAGCGTT TTGCGATGGA GTATGTGGCC 
GAGGATGGCG CTCGCCATCG TCCTATTATG ATCCATCGAG CGGTGTTAGG TTCTTTAGAA 
CGTTTTTTTG GTGTACTTAT TGAGCACTAC GAAGGTAAAT TTCCGCCTTG GCTCGCGCCT 
GTACAGGTTG TCGTGATGAG CATCACTGAT CGGCAGGAGG GATATGCCCG CCAAGTGGAA 
GAAGCGATGA GAAATAAAGG TTTTCGTTCT CTTTTGGACT TGAGAAATGA GAAAATCGGT 
TTTAAAATCC GTGAGCACAT TTTGCGCCGG ATTCCTTATT TGTTAGTCAT TGGAGATCGG 
GAGGTGGCAA ACCAGACCGT GGCCGTGCGT ACCCGATACA GTCAGGATCT GGGGGCGATG 
AGTCTTGATG CCTTTATGGA GCATCTTAGC GTTGACGTTG CTCGTCTTGG TCATAACATT 
TCTGAGGAGG ATTAG 

 

Protein sequence

MPVITLPDGS QRSFDHPVTV YDVAADIGPG LAKAALGGKI EGRLVDSSYP LEKDTKLTII 
TERDMDGLEI IRHSCAHLLA QAVKALYPEA QVTIGPVIED GFYYDFAYPK GFTPEDLEAI 
EAKMRELVEQ DLSVHRELKS REEAVSLFRR MGEEYKAEII ASIPSEEEIS LYRQGDFVDL 
CRGPHVPSTA RLKAFKLTKV AGAYWRGDAN NEMLQRIYGT AWPDKKALKA YLHRLEEAEK 
RDHRRIGADL DLFSIQEEAG GGLVFWHPMG ARIRRVIEDF WQERHTAAGY EMLYTPHIAH 
EELWQTSGHT DFYRESMYQP MEDDHQLYQL KPMNCPFHVL IYQGRLRSYR ELPIRWAELG 
TVYRHEMSGA LHGLMRVRGF TQDDAHIFCR EEQIENEILG ILDLTLEMLA AFGFDRYEID 
LSTRPEKSVG PEAIWEQATQ ALRSALDKKG LDYAVDEGGG AFYGPKIDIK IEDAIGRKWQ 
CSTVQLDFNL PERFAMEYVA EDGARHRPIM IHRAVLGSLE RFFGVLIEHY EGKFPPWLAP 
VQVVVMSITD RQEGYARQVE EAMRNKGFRS LLDLRNEKIG FKIREHILRR IPYLLVIGDR 
EVANQTVAVR TRYSQDLGAM SLDAFMEHLS VDVARLGHNI SEED