Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1048 |
Symbol | |
ID | 3707231 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 1154958 |
End bp | 1156526 |
Gene Length | 1569 bp |
Protein Length | 522 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637737553 |
Product | IMP cyclohydrolase |
Protein accession | YP_343086 |
Protein GI | 77164561 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0138] AICAR transformylase/IMP cyclohydrolase PurH (only IMP cyclohydrolase domain in Aful) |
TIGRFAM ID | [TIGR00355] phosphoribosylaminoimidazolecarboxamide formyltransferase/IMP cyclohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.144916 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCCA TAGCCCGCGC CCTTATCAGT GTCTCCGACA AAACCGGCAT CGTTCCCTTT GCACACCGGC TCCAGGCGCG GGGTGTCAAA ATCTTATCCA CTGGTGGCAG CGCCCAATTA CTCCAAAAAA ACAACATTGG AGCCACAGAA ATATCCACCT ATACCGGTTT CCCAGAAATG ATGGGGGGAC GCATTAAAAC ACTCCACCCC AAAATCCATG GAGGCATTCT AGGACGAAGG GAAACCGATG CCACCACTAT GGCGGAATAT AATATTGCCC CCATCGATCT GGTAGCCGTT AATCTTTATC CCTTCGAACA AACGGTGGCA AAACCAGATT GCGACTTGGC TACCGCTATC GAGAACATCG ATATTGGCGG ACCCACCCTG CTCCGAGCTG CGGCTAAAAA CCATGCGGCG GTGACCGTAA TCGTCGATCC AGACGACTAC GAAAGAGTCC TCCGTGAAAT GGAAGCAAAC GGCGGAGCCC TCTCATCCTC TACCCGTTTT GAATTGGCGG TGAAAAGCTT TGAACACACT GCACGCTACG ATGCCACCAT CGCTAATTAC CTAGGAGCGT TGACTCCAAA TGGCGAAAAG AGCGCGTTTC CCCGCAGCTA CAATATTCAA TTTGCCAAAA AGCAAGAAAT GCGTTACGGA GAGAATCCTC ATCAGCGGGC GGCCTTCTAT GTAGAACAAC CCCCTCCAGC GGGAACCATT GCCACCGCCC AACAATTACA AGGCAAGACA CTCTCCTTTA ACAATATTGC GGATACAGAT GCCGCTTTAG CATGTGTTAA AGCTTTTCGC GAGGCTCCTA CCTGCGTCAT CGTAAAACAC GCCAATCCTT GTGGAGTGGC TACAGGAATA AACCTACAAG AAGCTTATGA ACGAGCCTAC GCCGCTGATC CAGTTTCCGC TTTTGGTGGC ATTATTGCTT TCAACGAGCC GTTAGATCCA ACTACTGCAA AAACCATCAT CAAGCGCCAA TTCGCCGAAG TGATTATTGC CCCTGCAGTA ACAACAACGG CCCAAGAAAT ACTCACATCC AAACCTAATA TACGAGTCTT GGCTTGTGGT GAATGGTCAT CTCAAACTGC CGCCGGTTGG GACTATAAGC GAATTGTCGG CGGCTTACTA CTCCAGGACC AGGATACCGA TACAGTGCCT TTAGAGGCGC TTCAAACTGT TACGGAACGC TCCCCTACTC CCCAGGAATT AAAGGATCTC CTCTTTGCCT GGCAGGTGGT AAAATTCGTC AAATCCAATG CTATCGTCTA TGCCAAGAAT GGACGGACCA TAGGCGTGGG CGCGGGGCAA ACAAGCCGGG TGATGAGTAG TCAAATTGCG GAACTTAAAG CGAAAGAGGC AGGTTTTTCA ACCCAAAATG CGGTCCTGGC CTCAGATGCT TTTTTTCCCT TTCGGGATGG CCTGGAAGCC GCTGCTAAAG CAGGAATCTG TGCTGTTATC CAGCCTGGGG GTTCCAGGCG GGATAAGGAA GTCATTGCCG CTGCAAATGA ATGGGATATG GCAATGCTCT TTACTGGAAT GCGCCATTTC CGCCACTAA
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Protein sequence | MKPIARALIS VSDKTGIVPF AHRLQARGVK ILSTGGSAQL LQKNNIGATE ISTYTGFPEM MGGRIKTLHP KIHGGILGRR ETDATTMAEY NIAPIDLVAV NLYPFEQTVA KPDCDLATAI ENIDIGGPTL LRAAAKNHAA VTVIVDPDDY ERVLREMEAN GGALSSSTRF ELAVKSFEHT ARYDATIANY LGALTPNGEK SAFPRSYNIQ FAKKQEMRYG ENPHQRAAFY VEQPPPAGTI ATAQQLQGKT LSFNNIADTD AALACVKAFR EAPTCVIVKH ANPCGVATGI NLQEAYERAY AADPVSAFGG IIAFNEPLDP TTAKTIIKRQ FAEVIIAPAV TTTAQEILTS KPNIRVLACG EWSSQTAAGW DYKRIVGGLL LQDQDTDTVP LEALQTVTER SPTPQELKDL LFAWQVVKFV KSNAIVYAKN GRTIGVGAGQ TSRVMSSQIA ELKAKEAGFS TQNAVLASDA FFPFRDGLEA AAKAGICAVI QPGGSRRDKE VIAAANEWDM AMLFTGMRHF RH
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