Gene Noc_1046 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1046 
Symbol 
ID3707229 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp1153011 
End bp1153733 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID637737551 
Producthypothetical protein 
Protein accessionYP_343084 
Protein GI77164559 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.0509455 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACAAAAA ACACTACTCC ACGTATCATT ATCAAGGAAT ATCGCCCCTG GCGCGGGTGG 
CTCTTTAGTT TTGTCTTAAT CATTTTCAGT GGAGCTATTG GCTGGTTGCT TTCCTATCGG 
CTTTCTCCAC TGCCAGAACA GGCGCCCAAT CGCAATCTCT CTTCACCGGC ACCGATCTCC 
CAGAAACAAC TTTCTCATTT GCAGCAGGAA AATAGCCGTC TGCGGAAGCA CCTAGCCCGG 
CTCCAGCAAG AACTAGAAGT CGAACAATAT ACCCGTGCTG ACCTCAACGC CAATCTAGTA 
AACTTACAAG ATGAGATGGT GGAACTTACA CGTCAACTGT CAATTTATAA AGGGCTGGCG 
GAGTCTCTTG AGGAGCAAGG CATCCATATC CACGATCTTA AGTTTAGTAA AACAGCAACG 
GAACGGTTAC TCCATTATCG CCTGGTGCTC ACCCAAGGCC GCAGAATGGA CCATCTGACC 
CAGGGCCAAG TGCATTTGGC CATCCATGGC GTATTAAAGG GGAAACCCGT TCGATTTGAA 
CTCGATACCC TCTCCAAGGG CAATCCCCTT CGTTTTAAAT TTAAATACTT TCAAATCCTA 
GAAGGGGAAG TATTTTTACC AAAAAATTTT AAACCAACCC GGGTAAAAAT TGCCCTGCTT 
CCCGAGGAAC ATCCTTCTAA AGCCGTGGAA CAAACCTTCA GTTGGAGATC ATTAGGGGGC 
TAG
 
Protein sequence
MTKNTTPRII IKEYRPWRGW LFSFVLIIFS GAIGWLLSYR LSPLPEQAPN RNLSSPAPIS 
QKQLSHLQQE NSRLRKHLAR LQQELEVEQY TRADLNANLV NLQDEMVELT RQLSIYKGLA 
ESLEEQGIHI HDLKFSKTAT ERLLHYRLVL TQGRRMDHLT QGQVHLAIHG VLKGKPVRFE 
LDTLSKGNPL RFKFKYFQIL EGEVFLPKNF KPTRVKIALL PEEHPSKAVE QTFSWRSLGG