Gene Noc_1037 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1037 
Symbol 
ID3707259 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp1146459 
End bp1147160 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content49% 
IMG OID637737542 
Productpeptidase M50 
Protein accessionYP_343075 
Protein GI77164550 
COG category[R] General function prediction only 
COG ID[COG1994] Zn-dependent proteases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.489327 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAAGAGT TGTCAATCGT ACAGCGGATT GCCATTTGGG TGTTGCCTAT ATTGTTCGCT 
ATTACCGTCC ATGAGGTAGC GCATGGTTGG ATGGCGCTTC GATTGGGGGA TCACACTGCG 
CAAATGATGG GCCGGTTAAC GCTCAATCCC ATCAATCATA TCGATCCTAT TGGTACTTTG 
GTCGTTCCAG GGGTTTTATT ATTACTCGGC GGCGTTGTTT TTGGTTGGGC CAAGCCGGTA 
CCGGTGTCCT GGGATAAACT TCGCAATCCT CAGCGGGATA TGGCCATTGT TGCTTTGGCG 
GGACCGATGG CCAACCTCAT TATGGCTGTT TTCTGGGCGG TAGTATGCCG CCTGGGAATT 
GCTTTGGCGC TAGAGTTTCC CATGATGGGG GTGCCGCTAG CTTATATGGG GATTGCTGGG 
ATGCTCATTA ATGCCATCTT GATGATGCTA AATCTCATCC CCTTACCCCC TCTCGATGGA 
GGAAGAGTAT TGGTTGGAAT ATTGCCTGGC CCGCTTGCCT ATAAGGTAAG CCGTATTGAG 
CCTTATGGGC TTTTTATACT CCTTGGCCTG CTATTTACCG GTATTTTACA GGGTATCTTG 
GGACCCTTGG TAGATCTGCT TTTAAGTGGA TTAGTAGAGC TAGTAGGTGT GCCAAAGCGG 
GAATTTGTCG GAGGATTGTT AACTCTAATG GGAGCCCAAT AA
 
Protein sequence
MEELSIVQRI AIWVLPILFA ITVHEVAHGW MALRLGDHTA QMMGRLTLNP INHIDPIGTL 
VVPGVLLLLG GVVFGWAKPV PVSWDKLRNP QRDMAIVALA GPMANLIMAV FWAVVCRLGI 
ALALEFPMMG VPLAYMGIAG MLINAILMML NLIPLPPLDG GRVLVGILPG PLAYKVSRIE 
PYGLFILLGL LFTGILQGIL GPLVDLLLSG LVELVGVPKR EFVGGLLTLM GAQ