Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_1030 |
Symbol | |
ID | 3707252 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1140356 |
End bp | 1141582 |
Gene Length | 1227 bp |
Protein Length | 408 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 637737535 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_343068 |
Protein GI | 77164543 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 43 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCCCCCCC GTTTGAGAAA ACGACTAGTC AAGTCAATTA GAAACCGGGC TCGAGTGAGG TCGTCGGCGT CACGAAAAGC GGCGTCTCTG CCACGCCGAG AGGTAGGTGT CCGTGCCTAT GAGCGCGGTG CGCGATCCAG GCTGCAAAAA TTTCGGCAAG GAACGGCTTT AGCCGTTGCG TTGACCGCAG CGCTACTACT GCTGTTCGGC GGTATGGATG AAACGGCGGG TCAAGAGCCG AATAATACCA CGGTGATTTC CGCGCTTGAT AGCCCTGCGG TTAAACAGCC CATCAAGGCC GATCCCGAAG CCTCGTTGGA GGAAGCGACC ACGACTATCC GTGATCTGCT AAGCGGTTTT TATGGGTTGC TGCCAAAAAT TCTAATTGCC CTGCTCTTCC TGGTGGCAGC CTGGCTGTTA GGAAAAGCCT TGCGGGTGAT TACCCACAGA TTGCTGCGGG GATGGGAACG AAGTGAGGCG ATTGCCGCCC TGGTGCGCAT CGCTCTCTTT TTAGTAGCCA TTGGAGCGGG CCTCAGCGTT ATTGCAGGTG ATGCGAGAGC CTTGGTGGGA TCAGTGGGGC TGGCTGGGCT GGCGCTCTCA TGGGCGTTGC AAACGCCCAT CGAAAGCTTT ACTGGCTGGG TGCTTAATGC CTTGCGAGAC TATTATCGGC CTGGGGACCG TATTGCAGTG GGTGAGGTTT TTGGCGATGT ATACCGCATT GACATTTTGA CAACGACGGT TTGGGAAGCA GGCGGATCTG GCAAGCACGT GGCGGGCGCG CAACCGACGG GAGCTTTTAT TACCTTTCCG AATTGGGAAA TTCTCCGCTC CAATATTATC AATTACAGTC GGGACTTTCC CTATGTGTGG GATGAAGTCG TGTTCGGGAT TGCCAATGAA AGCGATCTCG CCTACACCGT CGAGATCTTT CGGCGCGTTG CCGGAGAAGT GGTTGGACCG ATGATGCGTC AACCTATCGC CGAGTATCGG CGCTTGTTAG AGCGCGAGCG GCTAGCGTTC GATGTGGAAG CCGAGCCGCA GGTGTATCTC TCCTTGGCAG AGGCATGGAC CAACTGCACC ATCCGTTATC TGGTGCCGGT TCGGCAGCGG CGGCGATGGG CGAGCGAGTT AATTCTAGCA CTCTCCATTG AGATGATACG CCCCGAACAC AAGGATCGCA TCATAGGAGG GTATCCCCGT AGGGAAATCG ATTTACTCGA CAATTAG
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Protein sequence | MPPRLRKRLV KSIRNRARVR SSASRKAASL PRREVGVRAY ERGARSRLQK FRQGTALAVA LTAALLLLFG GMDETAGQEP NNTTVISALD SPAVKQPIKA DPEASLEEAT TTIRDLLSGF YGLLPKILIA LLFLVAAWLL GKALRVITHR LLRGWERSEA IAALVRIALF LVAIGAGLSV IAGDARALVG SVGLAGLALS WALQTPIESF TGWVLNALRD YYRPGDRIAV GEVFGDVYRI DILTTTVWEA GGSGKHVAGA QPTGAFITFP NWEILRSNII NYSRDFPYVW DEVVFGIANE SDLAYTVEIF RRVAGEVVGP MMRQPIAEYR RLLERERLAF DVEAEPQVYL SLAEAWTNCT IRYLVPVRQR RRWASELILA LSIEMIRPEH KDRIIGGYPR REIDLLDN
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