Gene Noc_1007 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_1007 
Symbol 
ID3707268 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp1113631 
End bp1114632 
Gene Length1002 bp 
Protein Length333 aa 
Translation table11 
GC content47% 
IMG OID637737512 
Producthypothetical protein 
Protein accessionYP_343045 
Protein GI77164520 
COG category[S] Function unknown 
COG ID[COG2899] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGACATT TCAAATACTC TTTTTTAGTA ACCGTGGCGG GCTTGGTGGC AGCCTTTCTA 
TGGGGTGGAC CTGCCGGTTT ATTTATTGCC GCGATCCTGG GCGTTCTCGA AATTAGCTTG
TCCTTCGATA ATGCGGTCGT CAATGCATCT GTGCTTAAGG ATATGGACCC CAAGTGGCAA
GCTCGTTTTC TGACCTGGGG TATTCTGATT GCTGTATTTG GAATGCGCTT GGTTTTTCCC
GTGGCCATTG TGGCTATTGT GGCTGATATT GGGATACTAG AAGTGACACA GATGGCGCTT
AATGATCCGG ATGCTTATTC AGCTCATTTG CTCGCTTCCC ATGTAGATAT TTCCGCTTTT
GGCGGTATGT TTTTGCTGAT GGTGTTTTTA TCCTTTTTGC TTGATGAGAC AAAAGAGCTG
CATTGGTGGG GGCTGGTTGA AGAGAAATTG GCCGGGATCG GTAAGCTGGA ATCCATCGAG
ATCGTTATCG CCCTGGGAGT TTTATGGGCT CTCCAAAGTT TCTTGCCGCC CGAGGAGAAA
CTAGATGCCA TGCTGGCTGG GATTAGTGGT GTCATGCTCT TCGTCATTGT AGGTAGTGCG
TCTGGATTAT TTGAGGTAGA GGAAACAGGA GAAGCGGTTA CCCATGCGGC GAAGCGTAGT
GGAGTAATGG GTTTTCTCTA TCTTGAGGTA TTGGATGCTT CTTTCTCTTT TGATGGTGTT
ATTGGTGCTT TTGCCATTAG CAAGGATGTC ATTATTATTA TGCTGGGCTT GGCGATTGGC
GCCATGTTTG TTCGTTCTAT TACGGTATAC TTAGTCCGCA AGGGCACCCT AAGCGAGTAC
GTTTTCCTTG AGCATGGCGC CCACTATGCT ATTGGAGCCT TGGCGCTTAT CATGCTCGCA
AGCACCAAAG TTCATATACC CGAAGTGGTG ACAGGGTTGA TTGGTGCGGC TTTCATCGGT
TTGTCTTTGC TTTCTTCTAT TCGGTATCGA AATAAACATT AA
 
Protein sequence
MRHFKYSFLV TVAGLVAAFL WGGPAGLFIA AILGVLEISL SFDNAVVNAS VLKDMDPKWQ 
ARFLTWGILI AVFGMRLVFP VAIVAIVADI GILEVTQMAL NDPDAYSAHL LASHVDISAF
GGMFLLMVFL SFLLDETKEL HWWGLVEEKL AGIGKLESIE IVIALGVLWA LQSFLPPEEK
LDAMLAGISG VMLFVIVGSA SGLFEVEETG EAVTHAAKRS GVMGFLYLEV LDASFSFDGV
IGAFAISKDV IIIMLGLAIG AMFVRSITVY LVRKGTLSEY VFLEHGAHYA IGALALIMLA
STKVHIPEVV TGLIGAAFIG LSLLSSIRYR NKH