| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0995 |
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| Symbol | |
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| ID | 3707387 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1101776 |
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| End bp | 1103959 |
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| Gene Length | 2184 bp |
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| Protein Length | 727 aa |
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| Translation table | 11 |
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| GC content | 52% |
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| IMG OID | 637737501 |
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| Product | helicase RecD/TraA |
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| Protein accession | YP_343034 |
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| Protein GI | 77164509 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0507] ATP-dependent exoDNAse (exonuclease V), alpha subunit - helicase superfamily I member |
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| TIGRFAM ID | [TIGR01448] helicase, putative, RecD/TraA family |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0231069 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACGCTT TCCACCCAGA AGCCTCGCCT GAGTTCCTCG CCGGCACCAT AGAACGGGTT
ACTTTTCATA GCGAGGAAAC CGGATTCTGC GTCCTGCGAA TCAAAGTACG TGGTGAACAC
AATCTCGTCA CCGTAGTTGG CAATACCGCT ACGGTCACGC CGGGGGAATA TGTGGAATGT
CGCGGTGAGT GGATTAACGA CCGCACCCAT GGACTTCAGT TCAAAGCAAA ACATCTGAAA
GTCATCCCCC CCAGCACCCT CGAAGGGATT GAAAAATATC TCGGCTCGGG CATGGTCAGG
GGAATCGGCC CCCACTTCGC CAAGAAACTG GTGCAAGCCT TCGGTGAGCA GGTTTTCGAA
GTTATCGAAC ATACAGCCGA GCGCCTCACC GAATTAGACG GTATCGGCCC CAAGCGCAAA
GCGCGAGTCA TCCAGTCCTG GGCAGAACAA AAAGCGGTTC GCGCTATCAT GGTGTTTCTG
CAATCCCAGG GCGTAGGCAG CGCCAGGGCG GTTCGTATTT ATAAGACCTA TGGCGATCAC
GCTATCGAAC GGGTTCGCGA AAATCCTTAC CGGCTGGCTC TAGATATCCA TGGCATCGGC
TTTAAAACCG CCGATAGGAT TGCCCAACGA CTAGGAATCC CCGCCGATTC TCTCATCCGC
GCCCAGGCGG GAGTCCGTCA TGTACTCCAG GAATTTACGA CCGAAGGACA CTGCGCGATG
GAGCAGGACA AGTTAGTGGA AACAGCTAGT AAATTACTGG AAATCCCTGT TCCTACTATC
GAACAAGCCA TTGCTCAAGA AGTCACCGCA GGGCAACTCA TCGCCGAAGT TATTCATGAC
AAATCCTGCC TCTTTCTTAC TCCCCTTTAT CGCTCTGAAA CGGGGGTCGC CAAACATTTG
CAACGCCTCC TTCAGGGTCG TCCCCCTTGG GGAGAAATCA ATACGGATAA GGCAATCCCC
TGGGCGGAAG AGAAAACGGG ATTGCGCCTT TCTCCCTCTC AGCGCGCAGC GGTTACACAA
GCAGTCGGCA GCAAAATCAT TGTCATTAGC GGGGGACCGG GGGTCGGTAA AACCACTGTC
GTCAATAGCA TTATCCGAAT TGTTCAGGTC AAGCAAATCC AGATACACCT TGGGGCACCC
ACCGGGCGGG CAGCAAAACG GCTTGCCGAA TCGACCGGTT TTGAAGCCAA AACAATCCAC
CGTCTGCTTG AATTTAATCC TCATGCCATA GGTTTCAAGC ATCATAGGGG TAACCCCCTC
CATACGGATC TTGTCATTAT TGATGAAGTT TCCATGGTCG ACGTGGGATT GATGAATCAG
CTACTCCAAG CCATCCCCAG TCATGCGGCG TGCATATTGA TAGGCGATAG AGATCAGCTA
CCTTCGGTAG GGCCAGGGCA GGTGCTAGCG GATATTATTG CTTCCAAAAA AATCACCGCT
GTCCACCTCA CCGAGGTTTT TCGCCAAGCA GCCAGATCCA AAATCGTTGT CAATGCCCAT
CGAATCAATC AAGGAAAAAT GCCCGAGAGA ACCCATGAAG CAGCCCCGCT CAGCGATTTC
TATTTTATTC CCACCGAGTC TCCCGAAACC ATCCAGGATA GGCTCCTAGA ATTAGTAAGC
ACGCGGATTC CTAAACGCTT CGGCTTTGAC CCCATTCGCG ATATTCAAGT TCTTACCCCC
ATGAACCGCG GCAGCCTTGG AGCACAGGCG CTTAATGCGC TTCTGCAACA GCAACTCAAT
GCCCAAGCCA GCCCCAAGAT CAACCGGTTC GGTTGGACCT TTGCCCTGGG CGATAAGATC
ATTCAGACCG TCAATAATTA TGATAAAGAA GTCTTCAATG GAGATATCGG CAAAATAACA
AGAATAGATA TTGAGGAAAG TCTCGTGTAT ATCAGCATCG ATGACCGAGA GGTAGAATAC
GAGTTAGGCG AGCTTGACGA AATTGCTTTG GCCTACGCTA TCTCGGTGCA CAAAAGCCAG
GGTTCCGAAT ACCCCGCAGT CGTCATTCCC CTAGCCACCC AGCACTATAC CATGCTACAG
AAAAATCTGC TCTACACTGG CGTTACCCGG GGCAAAAAAC TGGTTGTCAT TGTGGGACAG
CCTAAAGCGC TTGCCATTGC CGTCAAAAGG ACTCATGTAA CCTCCCGCCT GACCCACCTT
TCAGCGCGGT TAGCAAACGG TTAA
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| Protein sequence | MNAFHPEASP EFLAGTIERV TFHSEETGFC VLRIKVRGEH NLVTVVGNTA TVTPGEYVEC
RGEWINDRTH GLQFKAKHLK VIPPSTLEGI EKYLGSGMVR GIGPHFAKKL VQAFGEQVFE
VIEHTAERLT ELDGIGPKRK ARVIQSWAEQ KAVRAIMVFL QSQGVGSARA VRIYKTYGDH
AIERVRENPY RLALDIHGIG FKTADRIAQR LGIPADSLIR AQAGVRHVLQ EFTTEGHCAM
EQDKLVETAS KLLEIPVPTI EQAIAQEVTA GQLIAEVIHD KSCLFLTPLY RSETGVAKHL
QRLLQGRPPW GEINTDKAIP WAEEKTGLRL SPSQRAAVTQ AVGSKIIVIS GGPGVGKTTV
VNSIIRIVQV KQIQIHLGAP TGRAAKRLAE STGFEAKTIH RLLEFNPHAI GFKHHRGNPL
HTDLVIIDEV SMVDVGLMNQ LLQAIPSHAA CILIGDRDQL PSVGPGQVLA DIIASKKITA
VHLTEVFRQA ARSKIVVNAH RINQGKMPER THEAAPLSDF YFIPTESPET IQDRLLELVS
TRIPKRFGFD PIRDIQVLTP MNRGSLGAQA LNALLQQQLN AQASPKINRF GWTFALGDKI
IQTVNNYDKE VFNGDIGKIT RIDIEESLVY ISIDDREVEY ELGELDEIAL AYAISVHKSQ
GSEYPAVVIP LATQHYTMLQ KNLLYTGVTR GKKLVVIVGQ PKALAIAVKR THVTSRLTHL
SARLANG
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