Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0982 |
Symbol | |
ID | 3707413 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 1084585 |
End bp | 1085739 |
Gene Length | 1155 bp |
Protein Length | 384 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637737488 |
Product | geranylgeranyl reductase |
Protein accession | YP_343021 |
Protein GI | 77164496 |
COG category | [C] Energy production and conversion |
COG ID | [COG0644] Dehydrogenases (flavoproteins) |
TIGRFAM ID | [TIGR02032] geranylgeranyl reductase family |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0176875 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGAAGATAT TTGATGTGAT TGTGGTAGGC GCTGGTCCTG GAGGATCTGC TGCTGCTTAT GGATTGGCCG CCTTGGGCTT TAAGGTAGCC TTAGTGGAAA GAAAAACTTT TCCCCGTGAA AAGCTCTGCG GTGGTCTGTT GAGCGCCCGG GCGCAAAAAG AGTTTATGCA GATATTTGGA GAAAATAAGT GGCCAGCTAT GGTGGAAAGG ACAGCGCAAG GGGCTAGCTT TTATTACCAG ACCCGTTATC TTAATGGGGT CCATGACCAC CAGCCTTTCT TTTTCACTTC CCGTATCCAC TTTGATGCCT GCCTGGCTGC GCTAGCAAGG GAGGCGGGGG CTTACCTTCT GGAAGGAATC GTCGTCACTT CGCTAGAAGC TGATGGCAAG GCGGTTCGCC TTAACAATGG AAAGATGCTT AAGGCGGATT TCGTGGTGGG TGCGGATGGG GTTCGTAGCC GTATTGCTGA AGCAATTCTA TTGCATACCG CTTCTAAAAA GAACCTCGCC TTGGGACTGG AAATTGAAGT TCCTCTTGAG CTAACCACAA AAACCGTTGT CGATCCTGAA ATTTATCTGG GCGTGGCGAA GTGGGGTTAC GGCTGGATCT TCCCCAAAAA AGAAACCCAA ACGGTGGGTA TTGGCGGCCT GCTGACCAAG AATCCAGATC TAAAAAGTAC ATTTAACACG TTTCTCCGCC AGCACTACGG TTCCCTCCCC AACATCCGCT GTAAGGGATA TCATCTCCCC TTTGGGAGTT ATAAGCGGAA TCCAGGACGG GCCAATATTC TTTTGGTGGG AGATGCGGCT GGCCTAGTCG AGCCCGTTAC GGGAGAAGGG ATTGCTTTTG CAATGCAGAG TGGGAGATTG GCTGCCAAAG CTATTGTCGC CGCAGCTGGT GCCGGGCAGC CTGAAAGCGC CTTGAAGTAC TACCTTCGAG AGTATCAGTC AATAGTTAGC CTATTTTCCC AAGCGAAAAT GATGCGATAT TTGGTCTTTC CCGATCCGAT GCAGCGATTG TTTGTAAGTC TGCTTCCCCA TAGCAAGGGT ATGGTAAGAA AATACCTTGA TCTCTTGGCG GGCGAAATCG ACTATAAGGA TTATATGCAA TTGATGATGA AAAAACTTGG AAGCCGGATA ATTGTTGCTC GTTAA
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Protein sequence | MKIFDVIVVG AGPGGSAAAY GLAALGFKVA LVERKTFPRE KLCGGLLSAR AQKEFMQIFG ENKWPAMVER TAQGASFYYQ TRYLNGVHDH QPFFFTSRIH FDACLAALAR EAGAYLLEGI VVTSLEADGK AVRLNNGKML KADFVVGADG VRSRIAEAIL LHTASKKNLA LGLEIEVPLE LTTKTVVDPE IYLGVAKWGY GWIFPKKETQ TVGIGGLLTK NPDLKSTFNT FLRQHYGSLP NIRCKGYHLP FGSYKRNPGR ANILLVGDAA GLVEPVTGEG IAFAMQSGRL AAKAIVAAAG AGQPESALKY YLREYQSIVS LFSQAKMMRY LVFPDPMQRL FVSLLPHSKG MVRKYLDLLA GEIDYKDYMQ LMMKKLGSRI IVAR
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