| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0936 |
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| Symbol | |
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| ID | 3707327 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | + |
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| Start bp | 1033749 |
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| End bp | 1035596 |
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| Gene Length | 1848 bp |
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| Protein Length | 615 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 637737445 |
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| Product | oligopeptide/dipeptide ABC transporter, ATPase subunit |
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| Protein accession | YP_342978 |
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| Protein GI | 77164453 |
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| COG category | [E] Amino acid transport and metabolism
[P] Inorganic ion transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0444] ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component
[COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
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| TIGRFAM ID | [TIGR01727] oligopeptide/dipeptide ABC transporter, ATP-binding protein, C-terminal domain
[TIGR02323] phosphonate C-P lyase system protein PhnK |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTTTGA CTGAACCCCT ACTGCAGGTC GAAGGGCTCA AAACTTGGTT TGAAACCCTG
GCGGGGACGG TACGGGCTGT CGATGGAGTG GATTTTGAAA TTAATCCAGG CGAGACTTTT
GTGCTGCTAG GAGAATCCGG CTGTGGTAAA TCCATGACGG CGCTTTCGGT AATGAGGCTG
ATAGCTGTTC CTCCAGGCCA TATAGCCGCG CAAAGAATAG TCCTAGAGAA TCGTAATCTG
CTAGAGTTGC CAGAAAGAGC TATGCGCAAG TTACGGGGCC GAAAGATTGC GATGATTTTT
CAAGAACCCC AGACTTCCCT GAACCCCGTT TTTACCATAG GAGATCAAAT CGGCGAGAGC
TTGCGTGTCC ACCTTGGCCT GCGGCGTTAT TCTCTCCGCC AGCGGGTTTT GGAGCTTTTG
GAAGCGGTGG GCATTCCCCA TCCTAGGCAG CGCATCGATG ATTATCCCCA CCAATTTTCG
GGAGGAATGA GGCAGCGAGT TATGATCGCC ATGGCCCTAG CCGGAGAGCC CGAGCTGCTG
ATTGCGGATG AGCCTACGAC TGCCTTGGAT GTGACTATCC AAGCCCAAAT TTTAGAACTG
CTCAAAGGGT TGCAAAGGGA ACGGGGCCTC TCTATTCTTT TGATTACGCA TGACCTAGGG
GTTGTGTCCC AGATGGCCGA TCGGATCGGG GTGATGTATG CGGGGCACCT GGTGGAACAG
GCCAGTCGGG AGCGTTTTTT CGCCGACCCG CTCCACCCAT ACTCCCGCAA ACTCTTTGAA
GCGCTCCCTA CCCATGGCAA GCGGGATCAG CGTTTGAATG TTATCCAGGG AAACGTTCCT
CCTCTCACTC AACCTTTTAA GGCTTGCCGT TTTGCTGATC GTTGTGACTT TGCCTGGGAA
GCCTGCCGAA TACAGGCCCC TAAGTGGATT TTGGCTGAAT CTGGCTACCA TGTTCGTTGT
CATCTTTATG ATCCAGATAT TGCTCCGAGC CGGCCTCCAG CGGGCCAGGA TAATTATGCC
CGATCGCCTT TGTCAGCGGT ACAACCTGCG GGTCAAGTGC TGCTCAAGGT AGAAGACCTG
AAAGTGTATT TCCCTATTCG CAAGGGAATA CTACGGCGGA TGAGCGGTCA TATTAAAGCG
GTTGATGGTG TTTCCCTGGA AATTCGCCGT GCTGAAACGT TGGCTTTAGT GGGGGAATCG
GGCTGTGGTA AGACCACCAC GGGTAAAGGG ATCTTGCAGC TGTTGCCGGT GACTGCTGGT
AGTGTGCGAT TTAACGGTGA AGAATTGACT AGGCTTAAGG GACGCGCCCT GCGCCAGCGG
CGGGCTGATT TCCAGGTTAT CTTCCAAGAT CCCTTTGCTT CCATGAATCC GCGCATGACG
GTTGCTGATA TTGTAGAAGA AGGCATGATT GTTCAGCGAG TAGGGGGAAG CGCAGAGGCC
CGGCAAGAGC GGGTTGCTGA ATTATTGCAG CGGGTAGGGT TGCCGGCTGA AGCTCGGGAT
CGTTACCCCC ACGAATTTTC TGGCGGGCAG CGGCAACGGA TCTGTATCGC CCGTGCTTTA
GCAGTTAAGC CCAAGCTTAT TGTTTGCGAT GAACCGACCA GTGCTTTGGA TGTTTCCGTC
CAGGCCCAAA TCTTGAATTT GCTGCGGGAA GTTCAGCATG AGTTTGGTCT GTCCTATTTA
TTCATTACCC ATAATCTGGC GGTAGTTGAA TATTTGGCCC ATCGGATAGC GGTGATGTAT
TTGGGCCGTA TCGTGGAAGA AGGAACGGTG ACCCAAGTGC TTCAGCGACC TCAACATTCT
TATACTAAAA CGCTCCTTGC TGCGGTGCCG TCGGTAGAGA GGGATTAA
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| Protein sequence | MPLTEPLLQV EGLKTWFETL AGTVRAVDGV DFEINPGETF VLLGESGCGK SMTALSVMRL
IAVPPGHIAA QRIVLENRNL LELPERAMRK LRGRKIAMIF QEPQTSLNPV FTIGDQIGES
LRVHLGLRRY SLRQRVLELL EAVGIPHPRQ RIDDYPHQFS GGMRQRVMIA MALAGEPELL
IADEPTTALD VTIQAQILEL LKGLQRERGL SILLITHDLG VVSQMADRIG VMYAGHLVEQ
ASRERFFADP LHPYSRKLFE ALPTHGKRDQ RLNVIQGNVP PLTQPFKACR FADRCDFAWE
ACRIQAPKWI LAESGYHVRC HLYDPDIAPS RPPAGQDNYA RSPLSAVQPA GQVLLKVEDL
KVYFPIRKGI LRRMSGHIKA VDGVSLEIRR AETLALVGES GCGKTTTGKG ILQLLPVTAG
SVRFNGEELT RLKGRALRQR RADFQVIFQD PFASMNPRMT VADIVEEGMI VQRVGGSAEA
RQERVAELLQ RVGLPAEARD RYPHEFSGGQ RQRICIARAL AVKPKLIVCD EPTSALDVSV
QAQILNLLRE VQHEFGLSYL FITHNLAVVE YLAHRIAVMY LGRIVEEGTV TQVLQRPQHS
YTKTLLAAVP SVERD
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