| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0916 |
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| Symbol | |
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| ID | 3707306 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 1008137 |
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| End bp | 1008808 |
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| Gene Length | 672 bp |
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| Protein Length | 223 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 637737424 |
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| Product | rhomboid-like protein |
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| Protein accession | YP_342958 |
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| Protein GI | 77164433 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0705] Uncharacterized membrane protein (homolog of Drosophila rhomboid) |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 33 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTCCAA TAAGAAACCC CAGCCCAACC TCGACTCTGC CAGCAATGAC CATTAGCCTG
ATAGGAATCT GTATCGCGGT CTTTTTGTGG GAACATTCAT TAAGCTCAAA GGAATTTACA
CGGGCCATCT ATCATTTTGC GGTCACCCCA GTATTTTTTC TGAATAAGGT GGCATTGGCT
GATAGCCCAA TACCTATCGA ATTTACCCTT ATTACCTCCA TGTTTTTTCA TGCCGATACA
TGGCATTTGG CCAGTAACCT ACTGTTTCTC TGGATCTTCG GGAAGACAAT CGAAGATGCT
ACCGGGCATG CTCGTTTTAT TATTTTTTAT TTTCTATGTG GAATTATAGC AATAATGCCA
TATATTCTTC TAAATCCTAC TTCCCAAAAT CCTATCATTG GTGCAAGTGG CGCTATTTCA
GGCGTATTAG GCGCTTATCT CCGATTATTT CCCCATTCCA GAATCATCGC TATTTATCTA
CGGGGAATTT ATCCTACTCT TGGTCAAGTA CCAGCAGAAT GGGTGCTTAT ATTCTGGTAT
GGACTGCAAC TCCTATACGG AATATCCGCC GACGCCGATC AAACAACCGT GGCATGGGAG
GTCCATTTAA GTGGTTTTGC TGCTGGCATG CTCTTCGTGC CTCTGTTCTA TCGCACAAGA
AAATCAACTT GA
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| Protein sequence | MFPIRNPSPT STLPAMTISL IGICIAVFLW EHSLSSKEFT RAIYHFAVTP VFFLNKVALA
DSPIPIEFTL ITSMFFHADT WHLASNLLFL WIFGKTIEDA TGHARFIIFY FLCGIIAIMP
YILLNPTSQN PIIGASGAIS GVLGAYLRLF PHSRIIAIYL RGIYPTLGQV PAEWVLIFWY
GLQLLYGISA DADQTTVAWE VHLSGFAAGM LFVPLFYRTR KST
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