Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0903 |
Symbol | |
ID | 3707288 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 984636 |
End bp | 986285 |
Gene Length | 1650 bp |
Protein Length | 549 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637737406 |
Product | glucose-6-phosphate isomerase |
Protein accession | YP_342945 |
Protein GI | 77164420 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0166] Glucose-6-phosphate isomerase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.144639 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACCTT ATCTAGCGCA GGCTCGCTCC TGGGCTTCCC TTCTCCAACA TTATGGCTGC ATAAAGAAGC AGCATATGCG GGATTTATTC GCAGCCGATC CTCAACGGTT TGATAAGTTT TCTCTTATTT TCAATGGCAT ATTATTTGAT TTTTCTAAGA ATCGGATCAC AGAGGAAACG CTGAAACTTC TTCTCGACCT AGCCCGTGAG CGAGAACTGC AGCAAGGGAT TAGCCGCATG TTTGCCGGCG AGCCGATTAA TAATACGGAA AATCGCCCGG TTCTACATGT TGCATTACGC AACCGTGCTA ATCGCCCCAT CATGGTAAAG GGCAAGGATG TGATGCCCCA GGTGAACGTT GTTTTGGAGC GTATGGGGAA ATTTTGCGAT AGGGTGCATC GTGGTCAGTG GCGAGGGTTT AGCGGAGAGC GCTTAACAGA TATTGTCAAT ATTGGGATCG GTGGTTCTGA TTTGGGTCCC GCCATGGTGA CTGAAGCCCT GCAGCCCTAT GCTAAATCTG GCTTCCGGGT CCATTTTGTT TCTAATATCG ATGGAACCCA ATTAGCCGAA ACTCTCAAAA CTATTCGACC CGAGACCGCC TTGTTCGTAA TTTCTTCAAA GACCTTCACG ACTCAGGAAA CTTTAACCAA CGCTCATAGC GCACGGAATT GGTTTCTTCG TGCCGCACCT GATGATAAGG CGATAGCTAA GCATTTTATT GCGGTCTCTA CCAACCGGTC TGAAGTAGAA AAATTTGGCA TTGATCCCTG CAATATGTTT GAGTTTTGGG ATTGGGTTGG CGGCCGTTAT TCTCTTTGGA GTGCTATTGG GTTATCCATA GCCCTTTATC TTGGCATGGA AAATTTCGAA CAATTGCTTG AAGGTGCCCA CGAGATGGAT AAGCATTTTC AGGAGACGCC CCTCAAGCAA AATATACCGG TAATTGCCGC CTTAGTGGGT ATCTGGAATA TTAATTTTTT AGGGGCTCAA AGCCATGCTG TTTTGCCTTA CGATCAGTAT TTAGAACGGT TTCCCGCCTA CTTACAACAA TTGGAGATGG AAAGTAATGG CAAACATGTG ACCCGCGGCG GAGCATCCGT GAATTATGCT ACGGGTAATG TTATCTGGGG AGCGCCTGGT ACCAATGGCC AGCATGCCTT TTTCCAGCTT TTGCATCAAG GGACGCCTTT GATAACGGCG GATTTCCTGG CATCTGCTGA ATCCCATAAT CCTCTTGGAG AACATCACCA GATATTATTA TCGAATTTTT TTGCTCAGAC CGAAGCCCTA ATGAAAGGAA AAGACGAGGC TGAGGTGAGA GCGGAGCTGG AAGAGGCGAA TCTTGCTAAG GGGGAGGTAG AGGCGCTTAT CCCCCACAAG CTTTTTGACG GCAACCGTCC CAGCAATTCT TTCCTCTTCT CTAAGCTGAC GCCTTGGACA TTAGGCGCGT TGATTGCCTT TTATGAGCAT AAAGTGTTTA CCCAGGGTCT TATTTGGGAT ATTAATTCGT TCGATCAATG GGGAGTAGAA TTAGGCAAGC AGTTGGCCAC AACAATCTTG CCGGAGCTGC AGGGTGGCGA GGAGGTGAAT AGCCACGATT CTTCTACCAA CGGCCTAATA AATTATTATA AGCGTATCCG TCACCTATAA
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Protein sequence | MKPYLAQARS WASLLQHYGC IKKQHMRDLF AADPQRFDKF SLIFNGILFD FSKNRITEET LKLLLDLARE RELQQGISRM FAGEPINNTE NRPVLHVALR NRANRPIMVK GKDVMPQVNV VLERMGKFCD RVHRGQWRGF SGERLTDIVN IGIGGSDLGP AMVTEALQPY AKSGFRVHFV SNIDGTQLAE TLKTIRPETA LFVISSKTFT TQETLTNAHS ARNWFLRAAP DDKAIAKHFI AVSTNRSEVE KFGIDPCNMF EFWDWVGGRY SLWSAIGLSI ALYLGMENFE QLLEGAHEMD KHFQETPLKQ NIPVIAALVG IWNINFLGAQ SHAVLPYDQY LERFPAYLQQ LEMESNGKHV TRGGASVNYA TGNVIWGAPG TNGQHAFFQL LHQGTPLITA DFLASAESHN PLGEHHQILL SNFFAQTEAL MKGKDEAEVR AELEEANLAK GEVEALIPHK LFDGNRPSNS FLFSKLTPWT LGALIAFYEH KVFTQGLIWD INSFDQWGVE LGKQLATTIL PELQGGEEVN SHDSSTNGLI NYYKRIRHL
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