Gene Noc_0900 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0900 
Symbol 
ID3707227 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp981261 
End bp982379 
Gene Length1119 bp 
Protein Length372 aa 
Translation table11 
GC content49% 
IMG OID637737403 
Producthypothetical protein 
Protein accessionYP_342942 
Protein GI77164417 
COG category[R] General function prediction only 
COG ID[COG0820] Predicted Fe-S-cluster redox enzyme 
TIGRFAM ID[TIGR00048] radical SAM enzyme, Cfr family 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCGACT CCAGAACCAA TTTGCTTAAT CTGGATCGAG CTGGGCTGGA TGCTTTTTTC 
ACCTGTCTCG GTGAAAAACC TTTTCGTGCC CGCCAGGTAC TTCGTTGGAT CCACCAGCGG
TTTGTCACAG ATTTTAGCGC TATGACTGAT CTTAATAAGT CGCTACGGGA GCGTTTGACG
GAGAGTGCGG TGATTTCCCT TCCGGAGATA ATTAAGCAGC ATCGTTCGGC CGATGGGACC
CATAAATGGT TGTTACGCAT GCATGGGAAC AACTGTATTG AAACGGTGTT CATCCCCGAA
GGAGATCGGG GTACATTATG TATTTCATCC CAGATAGGTT GTATTCTAGA TTGCTCTTTT
TGTGCCACGG GAAAGCAAGG ATTTAACCGT AATTTAGCGG TATCCGAAAT TATTGGTCAG
CTGTGGCTAG CGAATAAAAC CCTAGGACGG GATCCCAAGG GTGAGCGCAT CATTACTAAT
GTGGTGATGA TGGGTATGGG AGAACCCCTT GCCAACTTCA ATAACGTTGT TACCGCCATG
AATTTAATGC TAGACGATTT TTCTTACGGA TTGTCGTGGC GTCGTGTAAC TCTTAGCACT
GCAGGGATGG TTCCCGCCAT GGATCGGCTA CGAGCTGTTT GCCCAGTTAA CCTTGCGGTC
TCTCTCCATG CACCCACTGA TAAGCTGCGT GATGAACTTG TTCCCCTAAA CAAAAAATAT
CCCTTGCAGG ATTTGTTATC AGCATGTCGG CGCTATGTTG CTGGGGATAG AAGGCGCGCC
GTCACCTTCG AGTATGTTAT GTTGGCTGGT GTAAATGATT CTCTTCCGCA TGCCCGGGCT
TTGTTGCGGT TATTACGAGG CTTGCCTGCC AAGGTTAATC TCATTCCTTT CAATCCTTTT
TCGGGTAGTG TTTATCGTCG TTCTGATGCC GCGACCATTG ATCGCTTTCG GGAAGAATTG
TTACGGGGAG GAATCATGAC TGTCACCCGT AAAACTCGTG GCGATGATAT TGCAGCTGCC
TGTGGTCAGT TGGCAGGCCG GGTTCAAGAT CGTACTCGTC GTACCATGGA TAGGCAGCGT
TTGGTGAGTG TTTTACCCCG GTCTCCGTTA GCGTCATGA
 
Protein sequence
MTDSRTNLLN LDRAGLDAFF TCLGEKPFRA RQVLRWIHQR FVTDFSAMTD LNKSLRERLT 
ESAVISLPEI IKQHRSADGT HKWLLRMHGN NCIETVFIPE GDRGTLCISS QIGCILDCSF
CATGKQGFNR NLAVSEIIGQ LWLANKTLGR DPKGERIITN VVMMGMGEPL ANFNNVVTAM
NLMLDDFSYG LSWRRVTLST AGMVPAMDRL RAVCPVNLAV SLHAPTDKLR DELVPLNKKY
PLQDLLSACR RYVAGDRRRA VTFEYVMLAG VNDSLPHARA LLRLLRGLPA KVNLIPFNPF
SGSVYRRSDA ATIDRFREEL LRGGIMTVTR KTRGDDIAAA CGQLAGRVQD RTRRTMDRQR
LVSVLPRSPL AS