Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0895 |
Symbol | |
ID | 3707222 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 976860 |
End bp | 977519 |
Gene Length | 660 bp |
Protein Length | 219 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 637737398 |
Product | NapC/NirT cytochrome c-like |
Protein accession | YP_342937 |
Protein GI | 77164412 |
COG category | [C] Energy production and conversion |
COG ID | [COG3005] Nitrate/TMAO reductases, membrane-bound tetraheme cytochrome c subunit |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.356443 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTATCTA AATTAAAACA ATGGTGGCAA GCCATTGTTG AGTATTTTAA AGTTCATTGG CGCCCGGTTG CGGTCGGAGC GGGGGGGCTA TTTGCTCTAA TTGTTATCGT TTTTGGAGGC GAGGCGGCGT TATCAACGAC CACCTTTTGC ACTAGTTGTC ATTCGATGTC TTATCCGTAT GAGGAATTGC AAGAGTCCGC TCATTATGGC AGGTTTGGTT TGCAACCCCA ATGTAAGGAT TGCCATATTC CTCAGGGGTT AGGGAACTTC CACAAGGCAG TTTATACTCA TGTAGTGGAT GGGGCGCGAG AGCTTTATTT AGAACTTGTT AACGATTATT CTACACTTGA AAAATTTAAT GAGCGCCGGC AAGAAATGGC CCATCATGCC CGCATGAATC TAAAGGGATG GGATAGCGTG ACCTGCCGGG ATTGCCATCA GGATCCACAA CCAGCAGCTA AATCTGGCCA GCGGGCTCAC AAAAAGCTTG ATGACGGCTG GACCTGCATT GATTGCCATC AAAACCTTGT GCATGCTCCT GTGGAGCATA CCGATCTTGA TGCAAGTGAG CGGCGTGGCG AGATGGTCAT CATGGATGAG ATAGATTGGA CAGACCGTAA CCCGCTAGCC GGAGTGGAGA CTCGTTCGAT AAGGAATTAA
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Protein sequence | MLSKLKQWWQ AIVEYFKVHW RPVAVGAGGL FALIVIVFGG EAALSTTTFC TSCHSMSYPY EELQESAHYG RFGLQPQCKD CHIPQGLGNF HKAVYTHVVD GARELYLELV NDYSTLEKFN ERRQEMAHHA RMNLKGWDSV TCRDCHQDPQ PAAKSGQRAH KKLDDGWTCI DCHQNLVHAP VEHTDLDASE RRGEMVIMDE IDWTDRNPLA GVETRSIRN
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