Gene Noc_0894 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0894 
Symbol 
ID3707221 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp976118 
End bp976840 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content47% 
IMG OID637737397 
Productcytochrome c-554 precursor 
Protein accessionYP_342936 
Protein GI77164411 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.308781 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCAGA TAATTAGATA TACATTCTTT TATGCTCTAT TGGCGATCGC TATGGGAACG 
GTGTGGGCTC AAGGGGAACC ACCCTACGAT GGCCTTAAGA AATGTAAGAG TTGCCATGAG 
TCTCAGTATG ATTCATGGCT TGAAACGGAT CATGGACAGG CGATGAAGTC TTTAGAGCCT 
GGCGAAGAGG TAGAGGCCAA GGAAAAAGCA GGGCTGGACC CTGATGAGGA TTATACTGAA 
GATCCTGAGT GCGTCGGTTG CCATGTGACC GGGTTTAGGA AAGATGGGGG CTACGAAATT 
GATCTCTCCA ACCGCTTGAA AAAGTATTTA CAGGGTGTTG GTTGCGAATC CTGCCATGGT 
CCTGGGTCCA GGTACAAGCA TAACCATAAA GATGCGGCCA AAAAGTTTGA AGAGTCCCAG 
GAAACTACTT CTCGGCAGGA GCTCGCCGCT ATCGGGCAGG TTTTTACCGA TAAGGAATTT 
GAAGAGCGTT GCAATGCTTG TCACCTTAAC TACGAAGGTT CGCCATGGCC TCATGCTAAA 
GAGCCCTATA CCCCCTTCAC TCCTGAAGTG GATCCGAAAT ACGAGTTCAA TTTTGAAGAA 
GCGGTGCATA ATGATGAAGC GATGCACAAG CATTATAAGC TAGAGGGCGT TTTTTCTGGT 
GATCCGGTCG CATCGTTCCA TGAAGAATTC CAAAAGCATG CTGCGCCACC GCAGAAAAAA 
TAA
 
Protein sequence
MNQIIRYTFF YALLAIAMGT VWAQGEPPYD GLKKCKSCHE SQYDSWLETD HGQAMKSLEP 
GEEVEAKEKA GLDPDEDYTE DPECVGCHVT GFRKDGGYEI DLSNRLKKYL QGVGCESCHG 
PGSRYKHNHK DAAKKFEESQ ETTSRQELAA IGQVFTDKEF EERCNACHLN YEGSPWPHAK 
EPYTPFTPEV DPKYEFNFEE AVHNDEAMHK HYKLEGVFSG DPVASFHEEF QKHAAPPQKK