| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0891 |
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| Symbol | |
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| ID | 3707218 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 971206 |
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| End bp | 972720 |
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| Gene Length | 1515 bp |
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| Protein Length | 504 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 637737394 |
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| Product | transcriptional regulator |
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| Protein accession | YP_342933 |
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| Protein GI | 77164408 |
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| COG category | [E] Amino acid transport and metabolism
[K] Transcription |
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| COG ID | [COG1167] Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.00132013 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCAATTAC CGCTAAAGCT AGAACGCCAG AGCAAACAAA CCTTACAAAA CCAGCTTTTC
GAACAAATTC GCAGCTTGAT TTTGAGCGGT AAACTGAAGC CTGGTACACC CATGCCTGCC
ACCCGCTCTT TAAGCGAGCA GCTGGGAGTT TCCCGTAATA CGGTACTCTT GGCATATGAT
CGCCTCATCG CCGAGGATTA TCTTCAAACT CAAGAAGCAG TAGGCACCTA TGTCAACTCC
TACTTACCAC CAGACTCTCT TGTCCTCAAA GCTCCCACAC AACCACTTGT ACTACCTGAA
AAGCCTCAAT CAAGGCGGCA TCCCATATTA TTTCGAGGCC GGGCTCAAAA GGTAGCTAAT
TCCCAGCGAA GCCGCCTCGC AGTAGATTTT CGAGTGGGGC GTTTGGATCC TCACTCTTTC
CCTATTAAAA TCTGGCGTCG GCTAATTTTA CGCCATCTGG GCGCAGGCGG AGCTAATCTA
ACAGAATATC GCAATCCCAT TGGGATTCTA GCCCTACGAG AAGCAATAGC CAACCACCTA
GGACCTGCTA GAGGTATTGC TGTTACTCCA GAACAAATTA TTGTGGTCAG CGGCAGCCAA
CAAGCCCTAA ACATCGTCGC CCGTTTATTG ATAGCTCAAG GAACCCGGGT GGTCACAGAA
TGCCCCTGCT ACCAGGGAGC TGCTTATGTA TTTGAAAGCT ATGGCGCCCA ACTCCATCCT
GTGCCAGTGG ATCAATATGG ACTACAGGTC TCAAAACTTC CTCTTGCGCC CGTGAGTTTG
GCTTATGTTA CCCCCTCCCA CCAATATCCT ATGGGGTCAA CCCTTTCCCT AAAACGCCGC
GTTCAATTAT TAGACTGGGC TGGACAAGTC GGTGCGTACT TGATTGAGGA TGATTACGAT
AGCGACTTCC GGCATAATGG CTCCCCATTG ACAGCTTTAG CAGGATTGGA TCCCTATGAC
TGTGTGATTT ATATGGGAAC GGTATCAAAA TCGATTGGTG CCGGACTTCG TCTTGGCTAT
GTCTTAGTTC CAGAGGAGTT AATGGAACCT GCAAAGACAG TCAAGGCCTT ACTAGACAAC
GGTAATCCTT GGCTTGATCA AGCAATTCTA GCCGATTTCA TCTCTGGCGG TGGCTACGCC
AAGCACCTGC GGCAAATACG GCGAATGTAT CTCCGTCGCC GTGACTGCCT AATAGCCGCC
TTAAAATACC ATTTTGGAGA GGTTAAACTA TCGGGATTAG AGGGAGGAAT GCATATTGTT
TGGCATCTGC CCCCCGATTT CCCTACAGCC ATCGAAATGC AAGCAATTGC TCGGGAAACA
GGAGTTGGGA TGTATGCCTT AGAGAGCGGA GGCGCCTATG ATTACGGTTA TAAGGAATAC
AGTGAACGCA CCCTCCTCCT TGGTTATTCC TCTCTTCCCG AAACCCAAAT TCGTGCAGGA
ATTGCCAAAG TAGCAGCGGC GTTTTTAAAG GTGCTAGGCA ACCCCCCAGT AAAATCCAAA
CTGGCTTCTA GCTAA
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| Protein sequence | MQLPLKLERQ SKQTLQNQLF EQIRSLILSG KLKPGTPMPA TRSLSEQLGV SRNTVLLAYD
RLIAEDYLQT QEAVGTYVNS YLPPDSLVLK APTQPLVLPE KPQSRRHPIL FRGRAQKVAN
SQRSRLAVDF RVGRLDPHSF PIKIWRRLIL RHLGAGGANL TEYRNPIGIL ALREAIANHL
GPARGIAVTP EQIIVVSGSQ QALNIVARLL IAQGTRVVTE CPCYQGAAYV FESYGAQLHP
VPVDQYGLQV SKLPLAPVSL AYVTPSHQYP MGSTLSLKRR VQLLDWAGQV GAYLIEDDYD
SDFRHNGSPL TALAGLDPYD CVIYMGTVSK SIGAGLRLGY VLVPEELMEP AKTVKALLDN
GNPWLDQAIL ADFISGGGYA KHLRQIRRMY LRRRDCLIAA LKYHFGEVKL SGLEGGMHIV
WHLPPDFPTA IEMQAIARET GVGMYALESG GAYDYGYKEY SERTLLLGYS SLPETQIRAG
IAKVAAAFLK VLGNPPVKSK LASS
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