Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0825 |
Symbol | |
ID | 3707110 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 897955 |
End bp | 899760 |
Gene Length | 1806 bp |
Protein Length | 601 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637737327 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_342868 |
Protein GI | 77164343 |
COG category | [I] Lipid transport and metabolism |
COG ID | [COG1022] Long-chain acyl-CoA synthetases (AMP-forming) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCAGCTA AACTTAACTC CAGTATCTCC CCAGAGACCG CAGGCACCCT AGTTGGCCTA TTCCAAGAAC GGGTACGGCG TACCCCTAAC GCTGTTGCCT ACCGGCATTT CGATCCCAAA CAAAGGAGCT GGCAAGAGAC TACTTGGGCT GAAATGGCCA CCGAGGTCAC TCGTTGGCAG GCAGCGCTCT CCAAGGAAGA GCTAAATCCT GGGGACCGGG TTGCTCTTAT GCTCCGCAAC AGCCGGGAAT GGGTATTCTT TGAACAGGCT GCCCTAGGTC TAGAATTGGT GGTGGTGCCC CTCTATATTA ATGATCGCCC CGATAATGTT CGCTATATTT TGAAAAACGC CGAAGTCAAA CTGCTGATGA TAGAAGGGTA TCACCAATGG CAGGAAATAA AACAATGGTG GGCGCTACGT AAACTAGTGC GCGTGATCTC ATTAAATCCT TTTGATGATG AAGCCCGTGG TCAAAAACGC CTCTGCTATT TACAAGAATG GTTACCTAAA ACTGCAGATA AACACTACCC TAAACTCAAT AACCCTGATG CCCTTGCTAC TATAGTTTAT ACTTCTGGCA CGACGGGTTT ACCCAAAGGC GTTATGCTAA GCCACCATAA TATTCTATGG AATGCTCATA GCAGCTTGCA GAGTACACCA ATATACGAGG ATGATTTGTT CCTTTCCTTC CTACCCCTCT CCCATTCCCT GGAACGCACT CTCGGTTATT ATTTACCCAT GATGGCCGGA GCCCAGGTAG CTTATACCCG CTCCATTGCT AAGCTGGCGG AAGATCTGGT TACTATTAAA CCCACGGTCC TTGTAAGTGT TCCGCGCATC TTCGAGCGTG TTCATAACCA GATCTACGAT AAACTTCGAG AGAAAACCCT ATTAGAACGA GCGCTATTCA AGCTTGCCAT TGCTGCTGGC TGGCGTCAAT TCAATTACCA ACAAGGACGT GCTCCTTGGC ATCCTCTCTG CCTTTTAAAT CCTCTCCTGA GGCAAATCGT GGGCCGCCAA GTTTTGGCCC AGTTCGGTGG CCGTCTCCGG ATCGTCGTTT GCGGGGGTGC CCCACTGGTC TTTAATGTCG CCCGGGAATT ACTTGCTCTG GGATTACCCC TTATTCAGGG ATACGGGCTT ACCGAGGCTA GCCCTGTTAT CAGCGGAAAT TCCTTAAATA ACAATGACCC CAAGAGCGTT GGCACCCCCT TGCAAGATGT GGAAATCCGT ATTGGCGAGC ATAATGAACT GCTAGGGCGC AGCCCAGGAG TGATGCTAGG TTACTGGAAT AATCCTAAAG CAACCGCCGA AGTCATCGAT GAGGAAGGTT GGCTGCATAC TGGTGACCAA GCCCGTATTG AACAAGGACG TCTCTATATC ACCGGGCGCA TTAAAGAAAT CATTGTGCTA GCTACCGGCG AGAAAGTCCC CCCCGGCGAA ATGGAAACGG CTATCGGCAC TGATCCCTTA TTTGATCAAG CCATGGTTGT TGGCGAAGGG AAGCCCTACC TAAGCGCACT GATAGTAGTC AATCCAGAAC ACTGGAACAC GCTTGCACAG GAGTTAAATC TTGATCCTCA CCAAAAACAG TCCCTTGAGC ATCCTGCCGT GCTTGAGGAG GTACTAGAAC GGATCGAGCA ACATACCCGT CAATTTCCCG GCTATGCGCG TATTCGCCGG GCCGCTTTAA CCCAAGAACG CTGGACTACA GAAAATGGCC TTGCCACCGC AACGCTGAAA GCACGCCGTA AACAGGTAAT CAAGCATTAT CGTAATCAAA TTAGCGCTTT ATATGAAGGA CATTAA
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Protein sequence | MAAKLNSSIS PETAGTLVGL FQERVRRTPN AVAYRHFDPK QRSWQETTWA EMATEVTRWQ AALSKEELNP GDRVALMLRN SREWVFFEQA ALGLELVVVP LYINDRPDNV RYILKNAEVK LLMIEGYHQW QEIKQWWALR KLVRVISLNP FDDEARGQKR LCYLQEWLPK TADKHYPKLN NPDALATIVY TSGTTGLPKG VMLSHHNILW NAHSSLQSTP IYEDDLFLSF LPLSHSLERT LGYYLPMMAG AQVAYTRSIA KLAEDLVTIK PTVLVSVPRI FERVHNQIYD KLREKTLLER ALFKLAIAAG WRQFNYQQGR APWHPLCLLN PLLRQIVGRQ VLAQFGGRLR IVVCGGAPLV FNVARELLAL GLPLIQGYGL TEASPVISGN SLNNNDPKSV GTPLQDVEIR IGEHNELLGR SPGVMLGYWN NPKATAEVID EEGWLHTGDQ ARIEQGRLYI TGRIKEIIVL ATGEKVPPGE METAIGTDPL FDQAMVVGEG KPYLSALIVV NPEHWNTLAQ ELNLDPHQKQ SLEHPAVLEE VLERIEQHTR QFPGYARIRR AALTQERWTT ENGLATATLK ARRKQVIKHY RNQISALYEG H
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