Gene Noc_0823 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0823 
Symbol 
ID3707108 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp896807 
End bp897553 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content51% 
IMG OID637737325 
ProductOmpA/MotB 
Protein accessionYP_342866 
Protein GI77164341 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAAAAG GTATAAGCCA TAAACCATTG TGGCTTGCTT TAGCCATTAG CATGGGCATG 
ATAGGCTGTG CTGCCGATGG CCGATATAGC CAGACGCAGA AAGGGTCTGC GGTGGGAACA
GTGGGGGGGG CGGCAGCCGG CGCTGCTATT GGCGCAGCTA TTGATGGAGG TAGTGGAGCG
GGTTGGGGGG CCTTGGCAGG CGCGGTGGCT GGTGGATTAA CGGGGTCGGC CGTGGGCTAT
ATGAATGATC AACAACGGGA AATGGAAGCC GCGTTAGCTG AAGAGAGGCG TGGCCATCAG
TTAGAGATTC AACGGCTGCA GGATGAGAGC TTAAAGCTCG ATATTCCTAG TGAGATTTCC
TTTGATCACG ATAGCGACGT TTTAAAACCG GCTTTCCTTC CTACCCTGGA TAAAATCGCC
GAGGTTTTGA AAAAATATAA TAAAACGGTT GTCCATGTGA TTGGTCATAC GGACAGTACG
GGATCGGAGA AATACAATTT AGATTTGTCG TTGCGGCGAG CTGGAAATGT AGCTGTATAT
TTCGAGAGAA AGGGAGTTCC TTCGCAACGT TTGAGTATTT ATGGACGAGG GGAGAGCGAA
CCTCGCGCAA GCAATGCTAC TGCGGCGGGC CGGCAACTCA ACCGGCGAGT TGAGATTATT
TTGAAGCCTA TTTTGGAGGG GGAAGAGCAT AAAGCCTTTG AGGCACCCGT AACTTCTCGC
AGCCCCTATG GAGAAGAATT TCCGTAG
 
Protein sequence
MRKGISHKPL WLALAISMGM IGCAADGRYS QTQKGSAVGT VGGAAAGAAI GAAIDGGSGA 
GWGALAGAVA GGLTGSAVGY MNDQQREMEA ALAEERRGHQ LEIQRLQDES LKLDIPSEIS
FDHDSDVLKP AFLPTLDKIA EVLKKYNKTV VHVIGHTDST GSEKYNLDLS LRRAGNVAVY
FERKGVPSQR LSIYGRGESE PRASNATAAG RQLNRRVEII LKPILEGEEH KAFEAPVTSR
SPYGEEFP