Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0823 |
Symbol | |
ID | 3707108 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 896807 |
End bp | 897553 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 637737325 |
Product | OmpA/MotB |
Protein accession | YP_342866 |
Protein GI | 77164341 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG2885] Outer membrane protein and related peptidoglycan-associated (lipo)proteins |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAAAAG GTATAAGCCA TAAACCATTG TGGCTTGCTT TAGCCATTAG CATGGGCATG ATAGGCTGTG CTGCCGATGG CCGATATAGC CAGACGCAGA AAGGGTCTGC GGTGGGAACA GTGGGGGGGG CGGCAGCCGG CGCTGCTATT GGCGCAGCTA TTGATGGAGG TAGTGGAGCG GGTTGGGGGG CCTTGGCAGG CGCGGTGGCT GGTGGATTAA CGGGGTCGGC CGTGGGCTAT ATGAATGATC AACAACGGGA AATGGAAGCC GCGTTAGCTG AAGAGAGGCG TGGCCATCAG TTAGAGATTC AACGGCTGCA GGATGAGAGC TTAAAGCTCG ATATTCCTAG TGAGATTTCC TTTGATCACG ATAGCGACGT TTTAAAACCG GCTTTCCTTC CTACCCTGGA TAAAATCGCC GAGGTTTTGA AAAAATATAA TAAAACGGTT GTCCATGTGA TTGGTCATAC GGACAGTACG GGATCGGAGA AATACAATTT AGATTTGTCG TTGCGGCGAG CTGGAAATGT AGCTGTATAT TTCGAGAGAA AGGGAGTTCC TTCGCAACGT TTGAGTATTT ATGGACGAGG GGAGAGCGAA CCTCGCGCAA GCAATGCTAC TGCGGCGGGC CGGCAACTCA ACCGGCGAGT TGAGATTATT TTGAAGCCTA TTTTGGAGGG GGAAGAGCAT AAAGCCTTTG AGGCACCCGT AACTTCTCGC AGCCCCTATG GAGAAGAATT TCCGTAG
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Protein sequence | MRKGISHKPL WLALAISMGM IGCAADGRYS QTQKGSAVGT VGGAAAGAAI GAAIDGGSGA GWGALAGAVA GGLTGSAVGY MNDQQREMEA ALAEERRGHQ LEIQRLQDES LKLDIPSEIS FDHDSDVLKP AFLPTLDKIA EVLKKYNKTV VHVIGHTDST GSEKYNLDLS LRRAGNVAVY FERKGVPSQR LSIYGRGESE PRASNATAAG RQLNRRVEII LKPILEGEEH KAFEAPVTSR SPYGEEFP
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