Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0808 |
Symbol | |
ID | 3707093 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 881441 |
End bp | 882250 |
Gene Length | 810 bp |
Protein Length | 269 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637737310 |
Product | ribosomal protein S2 |
Protein accession | YP_342851 |
Protein GI | 77164326 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0052] Ribosomal protein S2 |
TIGRFAM ID | [TIGR01011] ribosomal protein S2, bacterial type |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.15468 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGAATG TCACCATGCG TCAAATGTTA GAAGCTGGCG TTCATTTTGG CCACCAGGCT CGCTATTGGA ATCCGAAGAT GGCACCTTAT ATCTTCGGCA AGCGCAATAA TATCCATATT ATCAACTTAG AAGAAACGCT GCCATTATAT ATGGAAGCGA CGAATTACCT TGGTCGGCTA GCTGCAAATA AAGGTACAGT TTTATTTGTG GGCACCAAAC GGGCGGCTCA AGAGCCTGTC CGAGAAGAGG CAGGGCGCTG CGGTATGCCT TATGTGAACA GCCGTTGGCT GGGGGGGATG CTCACTAATT TTCAGACTGT GCGGCGGTCT ATCAAACGTC TTCATGATTT AGAGGCGATG ATCCAGGATG GTAGTTTGGA TCGGCTTAAA AAAAGAGAAG CGTTGACAGT GAGGCGAGAT CGGGACAAGC TTGAGAATAA CCTTGGCGGT ATCAAAAACA TGACTCATCT TCCTGATGCT TTATTTGTTA TTGATGTAGA GCATGAGCGA ATTGCAGTAG ATGAAGCAGC TAAGCTGGGC ATCCCCGTGG TGGCGGTGGT AGATACCAAT AGCGATCCGA GGAAGGCGGA CTATATTATT CCAGGCAATG ATGACGCTAT TCGGGCTATC CGCCTCTATC TGCGCGGGAT TGCCGATGGG ATTATTGATG GGCGTACCAC TGCTGCTGCG GCTAGCGCGA GTAAAGCAAG TAAGGATGAA TTTGTGGAGA TGGAAGAGGC TAGCGAAGAG GAGACTCTCA CCGAATCGTT GAGTGAGAAG AGTGCTTCAA CAGATGCGAG CGTTACCTAA
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Protein sequence | MANVTMRQML EAGVHFGHQA RYWNPKMAPY IFGKRNNIHI INLEETLPLY MEATNYLGRL AANKGTVLFV GTKRAAQEPV REEAGRCGMP YVNSRWLGGM LTNFQTVRRS IKRLHDLEAM IQDGSLDRLK KREALTVRRD RDKLENNLGG IKNMTHLPDA LFVIDVEHER IAVDEAAKLG IPVVAVVDTN SDPRKADYII PGNDDAIRAI RLYLRGIADG IIDGRTTAAA ASASKASKDE FVEMEEASEE ETLTESLSEK SASTDASVT
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