Gene Noc_0803 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0803 
Symbol 
ID3707069 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp875762 
End bp876208 
Gene Length447 bp 
Protein Length148 aa 
Translation table11 
GC content50% 
IMG OID637737305 
ProductNusB antitermination factor 
Protein accessionYP_342846 
Protein GI77164321 
COG category[K] Transcription 
COG ID[COG0781] Transcription termination factor 
TIGRFAM ID[TIGR01951] transcription antitermination factor NusB 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
GTGAGTAATC GTCGTTCGAA GGCCCGCACG GCTGCTTTGC AGGGGCTTTA TCAGTGGCAG 
TTGATGGGAC AGGATGTCGA TAAAATCGAT ATTGAATTCA TTGTTCAGGA TATACGGGGT
ATTGATCATG CCTATTTTCA GGAATTGTTG CGAGGAGTGC CCCAGCGCCA AGGGGAGCTA
GATGAATGTC TCGGACCCTT TTTAGATCGG CCTATTAATG AAGTCGACCC GGTGGAATGC
GCCATTTTGA GAATAGGGGC ATTTGAATTG CTTTGTCGTC CTGAGATTCC CTATCGGGTT
GTGCTAAATG AAGCCATTGA GTTGGCTAAG CGCTTTGGCG CCGAGCATGG CCATCGCTAT
GTCAACGGCA TTCTCGATAA AGTGGCTCAA AAAGTACGTG CTACCGAGTT TCGGTCCCGA
GCTCTTAGAC GGCGGTTGCA GACTTAG
 
Protein sequence
MSNRRSKART AALQGLYQWQ LMGQDVDKID IEFIVQDIRG IDHAYFQELL RGVPQRQGEL 
DECLGPFLDR PINEVDPVEC AILRIGAFEL LCRPEIPYRV VLNEAIELAK RFGAEHGHRY
VNGILDKVAQ KVRATEFRSR ALRRRLQT