Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0786 |
Symbol | |
ID | 3707052 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 859961 |
End bp | 860740 |
Gene Length | 780 bp |
Protein Length | 259 aa |
Translation table | 11 |
GC content | 49% |
IMG OID | 637737288 |
Product | hypothetical protein |
Protein accession | YP_342829 |
Protein GI | 77164304 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02595] PEP-CTERM putative exosortase interaction domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 28 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGCTCAGTA AACTAAGAAT TCCAATAATT TTAATGGCGT TAAGTATGAC TTCTACCGTC CATGCTGTTC CGACCTTGCA AGTCGGTGTT CCCGGCGGCG TCGGTGAAGG AGCGTATGGG GATTATCAGG GAAGCACATT CAATCCGGTA GAAGAAGACA CCGCCATTAC CAATGGAAAT AGTCTTTTTG TGGCGGGTGT TTACAAGCCC AATACGCGAT TTCTAGGAGG ACAGTTTTCA GGGGGGGATA ACTGGAGTGA TTTTGGCTAT GACAGCAGTT TTGATACTCG TGGAGCCGTA TTGCTAGCCG CGGTTCCTGA CGGCACCCTG AGCGCAGCTG ATGCCAGTTT AACAATTAAT GGTTTAGGGT CATTCTTTAG GTTGCCGAAT CTGGGCAGTC TTTTCCCTAA CCGCCATGAT CCCCTCAAAG ATGATATTTC GGATTTCCTG TTTTATGATA TTGGCGATTT TGCTAAAAAT AGCGGGGCTG TCCCTAATTT TGCGGATGAA ACGGGGGCAG CGGATGGGGA AATCAAAACC CTTACCATCG CTGGCGCCAG TGGCCTGGAT TGGATCCATT TTGATGTGCT AGCCCTGGAA ACCCGTCAGC AAGGCGGGGG CAGGTTTAGA ACCTCCTTGG CCAATAACCC TGGATCCCAT GATGTAACTT GGAATCAAGG CGGTGGAGGG TTGCAACAAA TTCCTGAGCC CAGCGTCCTC GCCCTTTTTG GCGTTGGTTT TCTAGGCTTG GGTTTCTGTA GGCGTTATCG TCTGCATTAA
|
Protein sequence | MLSKLRIPII LMALSMTSTV HAVPTLQVGV PGGVGEGAYG DYQGSTFNPV EEDTAITNGN SLFVAGVYKP NTRFLGGQFS GGDNWSDFGY DSSFDTRGAV LLAAVPDGTL SAADASLTIN GLGSFFRLPN LGSLFPNRHD PLKDDISDFL FYDIGDFAKN SGAVPNFADE TGAADGEIKT LTIAGASGLD WIHFDVLALE TRQQGGGRFR TSLANNPGSH DVTWNQGGGG LQQIPEPSVL ALFGVGFLGL GFCRRYRLH
|
| |