Gene Noc_0780 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0780 
Symbol 
ID3707046 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp853120 
End bp853851 
Gene Length732 bp 
Protein Length243 aa 
Translation table11 
GC content54% 
IMG OID637737282 
Productisochorismatase hydrolase 
Protein accessionYP_342823 
Protein GI77164298 
COG category[Q] Secondary metabolites biosynthesis, transport and catabolism 
COG ID[COG1335] Amidases related to nicotinamidase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.473619 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCATT CCAACGCACC CTTAAAGGAA AGTTTTGATC CACTGCGGGC CAGCTACCGG 
GAAACCGTTA CCGAAATTCC CGCCGTGGTG GAATCCCTGG AAAAGCGCCA CACTGCACTG
CTGGTGGTAG ACTTACAATA CCTGGATGCC GCGCCTGGCT ATGGGGTTTT CTCCCATTTA
TCCAAGGGGA AGGTTTCTAA AGACACCCCC GAATTTTATT ATTTCGATCA GCTCGAGCGG
ATCGTCCTAC CCAACGTGCA GCGTCTGCAA ACCGCCTTTC GGGCCAATAA CCTGGAAGTG
ATCCATACCC GTATTCAGTC CTTGACCAAA GATGGCCGTG ATCGCGGCCC GCAACACAAA
CGCTTGGGGC TCCATGCCCC CGCTGGTTCC AAGGAGGCTG AATTTCTGCC AGCAATCGCC
CCCCGGGGAG ATGAGATCAT CATCAACAAA ACCGCCAGTG GCGTTTTTAA TGCCACTAAT
TTGTCCTACA TCTTGCACAA TCTGGGAATT ACGGGCCTGT TTGTGGCGGG AGTCTATACC
AATGAATGCG TCTCCACGGC TATTCGCGAC GCCTGCGATT TAGGTTTTTT CACCACCCTG
ATCGAGGATG CTTGCACGAC CGTCACTCCA GAGCTGCAAA AGGCGACCCT GCGTGCCCTG
AAAGATCGCT ATGCCCGAGT CTTGTCTACT GACGAGGCCA TTGCGGAAAT CAATCAGGTA
GTGGCCGCGT GA
 
Protein sequence
MTHSNAPLKE SFDPLRASYR ETVTEIPAVV ESLEKRHTAL LVVDLQYLDA APGYGVFSHL 
SKGKVSKDTP EFYYFDQLER IVLPNVQRLQ TAFRANNLEV IHTRIQSLTK DGRDRGPQHK
RLGLHAPAGS KEAEFLPAIA PRGDEIIINK TASGVFNATN LSYILHNLGI TGLFVAGVYT
NECVSTAIRD ACDLGFFTTL IEDACTTVTP ELQKATLRAL KDRYARVLST DEAIAEINQV
VAA