| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0716 |
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| Symbol | |
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| ID | 3706982 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Nitrosococcus oceani ATCC 19707 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007484 |
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| Strand | - |
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| Start bp | 774396 |
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| End bp | 775181 |
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| Gene Length | 786 bp |
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| Protein Length | 261 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 637737219 |
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| Product | transmembrane protein |
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| Protein accession | YP_342760 |
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| Protein GI | 77164235 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4105] DNA uptake lipoprotein |
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| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.000000618184 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGGTTTC TTAAATTTCT GTCCTTGTGC CTAGTTCTAT GGCTTGGAGG ATGTGCTTGG
CTTGACAAAC CTCCCCCCAA GCAGCCGGAA GCTGATTGGA CTGTTGAACG CTTCTATGCC
GAGGCCAAAA CCGCTCTTGA TGCCGGCGAT TACCAAAAAG CCATCTCTTT CTATGAGCAG
CTCGAAGCCC GTTATCCCTT TGGCGCTTAT GCCCAGCAAG CACTCCTAGA GTCCGCTTAT
GCCTACTACA AATTCAATGA ACCCGAATCG GCGCTTGCCG CGTTAGACCG TTTCATTCGC
TTGTATCCTC TCAACTCTCA TATGGATTAC GCTCATTACC TTAAAGGGTT GGTAAGCTTT
CATCGCGGAG TTGGGCTCGT AGAAAAATAT ATTCCCCGGG ATGAGACCCA GCGAGACCCA
GAATCCGCCC GGAATGCCCT CAAGAGTTTC AAGACATTGA TTCAGCGCTT CCCTGATAGC
AAATATGCCG AAGACAGCGC CCAACGCATC GTCTACCTGC GTAATCGGCT CGCACAACAC
GAAATTAATG TGGCCCACTA TTATATGCGA CGGGGTGCCT ATATTGGAGC CATCAATCGC
GCCAAATATG TCGTGGAAAA TTACCAGCGC ACTCCCCCGG TGCCTGAAGC ACTTACCATT
ATGGCACGGG GATATGAAAT TCTTGGCTTA AATGAGCTAA AGGAAGATAC CCTGCGAGTG
CTGGAAGCTA GCTTTCCAGG ACATCCTGGT ATTGCCAAGG CGAGGATGCT TAAAGCAGTA
AAATAG
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| Protein sequence | MWFLKFLSLC LVLWLGGCAW LDKPPPKQPE ADWTVERFYA EAKTALDAGD YQKAISFYEQ
LEARYPFGAY AQQALLESAY AYYKFNEPES ALAALDRFIR LYPLNSHMDY AHYLKGLVSF
HRGVGLVEKY IPRDETQRDP ESARNALKSF KTLIQRFPDS KYAEDSAQRI VYLRNRLAQH
EINVAHYYMR RGAYIGAINR AKYVVENYQR TPPVPEALTI MARGYEILGL NELKEDTLRV
LEASFPGHPG IAKARMLKAV K
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