Gene Noc_0658 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0658 
Symbol 
ID3706890 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp711940 
End bp712437 
Gene Length498 bp 
Protein Length165 aa 
Translation table11 
GC content47% 
IMG OID637737166 
ProductIS630 family transposase 
Protein accessionYP_342707 
Protein GI77164182 
COG category[L] Replication, recombination and repair 
COG ID[COG3335] Transposase and inactivated derivatives 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA AGAGCTTTCT TCGCCTTCGT GAACGCTATC GCCGCCGCGG CAAAAGATTT 
GTCTATCTTG ATGAAAGCGG TTTTGAGCCG GAGGTTTCCC GTCGTTACGC TTACGCTCCA 
AAGGGGCGGC GTGTTTATGG TCTGATCTCC GGTCATCGCA GACCGCGAAC CTCTTTATTG 
GCCGCCCGTA TGGATGAAGG CTTTGAAGCG CCGTTTCTAT TTGAGGGAAC CTGTAACACG 
GCTGTGTTCA ATGCATGGCT GGAAAAAGAG CTTTGCCCCT TGCTCAACAG CAACCACATT 
GTCATCATGG ATAATGCTCC GTTCCACAAA GCCGTTTCTT CACGTGAAAT CATCAAAAAA 
ACAGGGGCGG GAATTTTATT CCTCCCCCCT TATTCCCCTG ACTTTAACCC CATAGAAAAA 
GACTTCGGAA ATATCAAAAA AATCAGAGAA TACAACGAAC ATGAAACCCT TGAGAATATC 
GTTGCAGCGT ATCAGTAA
 
Protein sequence
MKRKSFLRLR ERYRRRGKRF VYLDESGFEP EVSRRYAYAP KGRRVYGLIS GHRRPRTSLL 
AARMDEGFEA PFLFEGTCNT AVFNAWLEKE LCPLLNSNHI VIMDNAPFHK AVSSREIIKK 
TGAGILFLPP YSPDFNPIEK DFGNIKKIRE YNEHETLENI VAAYQ