Gene Noc_0615 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0615 
Symbol 
ID3706847 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp663624 
End bp664823 
Gene Length1200 bp 
Protein Length399 aa 
Translation table11 
GC content53% 
IMG OID637737123 
ProductPhage integrase 
Protein accessionYP_342664 
Protein GI77164139 
COG category[L] Replication, recombination and repair 
COG ID[COG4974] Site-specific recombinase XerD 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value0.862313 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTGACTG ATACCAAGCT TCGCAACCTG AAACCTAAAG ACAAACTCTA CAAGGTCAAT 
GACCGCGATG GGCTTTACGT GGCGGTTACG CCGGCAGGGA CAATCTCATT CAGGCACAAC
TATTCCATCA GCGGTCGCCA GGAGACATTG ACGATTGGTC GGTATGGCAC TGGTGGCATT
ACGCTCGCTG AAGCTCGCGA ACGACTGAGC GAAGCAAAAA AAATGATTAC CGCCGGCAAG
TCTCCGGCCA GAGAGAAGGC TCGCGACAAG GCGCGGGTGA AGGATGCTGA AACATTCGGG
GCGTGGGCGG AAAAGTGGAT GCGTGGTTAT CAGATGGCTG ATTCCACACG TGACATGCGT
AAGTCAGTCT ACAACCGTGA GTTGAAAAAG CGCTTTGGCA ATCAAAAATT GTCTGAGATT
ACCCATGAGG ATCTCCGTGC AGTAACTGAT TCCATCGTGG AAAGAGGTGC TCCGGCAACA
GCAGTTCATG CTCGTGAAGT GGTGCTACAG GTCTTTCGTT GGGCGATTGA GCGCGGGCAG
AAAGTAGAGA ACCCGGCGGA ACTGGTTCGC CCTACCAGTA TCGCCAGATT CGAGCCGCGC
GATCGGGCAT TGAGTCCTGC CGAAATTGGT CTGATGTATC GGTATATGGA TCGAGTCGGG
ACGTCGCCGC AATATAGAGC CGCGATAAAA CTGTTGTTGC TGACCATGGT GAGAAAGTCT
GAGCTGTCTA ACGCTACCTG GTCGGAAATC AATTTTAGCG AGGCTCTTTG GACTATACCG
AAAGAGCGCA TGAAGCGTAG AAACCCGCAC TTAGTATTTC TGTCACGTCA GGCTCTGGAC
ATCTTTATCG CATTGAAGAC CTTTGCCGGT GGATCCGAAT TTGTGCTCCC CTCGCGCTAT
GACTCGGACA TACCGATGAG CGCTGCAACC TTGAACCGCG TTCTAGCATT GACGTATCGG
GCGGCCCAGA AAGACGGCAA ACAGCTCAGC AAATTCGGCC CGCACGACCT GCGTCGCACG
GCCAGCACGC TACTGCACGA GTCCGGGTAT AACACGGACT GGATTGAAAA GTGTCTTGCC
CACGAACAGA AAGGTGTGCG GGCGATCTAC AACAAAGCAG AGTACCGAGA GCAGCGGGTT
GAGATGTTAC AAGATTGGGC GGATATGATT GACGAGTGGA CTAACGTGAA GCGGCAGTAA
 
Protein sequence
MLTDTKLRNL KPKDKLYKVN DRDGLYVAVT PAGTISFRHN YSISGRQETL TIGRYGTGGI 
TLAEARERLS EAKKMITAGK SPAREKARDK ARVKDAETFG AWAEKWMRGY QMADSTRDMR
KSVYNRELKK RFGNQKLSEI THEDLRAVTD SIVERGAPAT AVHAREVVLQ VFRWAIERGQ
KVENPAELVR PTSIARFEPR DRALSPAEIG LMYRYMDRVG TSPQYRAAIK LLLLTMVRKS
ELSNATWSEI NFSEALWTIP KERMKRRNPH LVFLSRQALD IFIALKTFAG GSEFVLPSRY
DSDIPMSAAT LNRVLALTYR AAQKDGKQLS KFGPHDLRRT ASTLLHESGY NTDWIEKCLA
HEQKGVRAIY NKAEYREQRV EMLQDWADMI DEWTNVKRQ