Gene Noc_0609 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0609 
Symbol 
ID3706841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp655681 
End bp656091 
Gene Length411 bp 
Protein Length136 aa 
Translation table11 
GC content50% 
IMG OID637737117 
Productbiopolymer transport protein ExbD/TolR 
Protein accessionYP_342658 
Protein GI77164133 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0848] Biopolymer transport protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.000633887 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGAGAAC AGTATAGCCA ACGCCAAAGC GGATCGGCAG TGAATATCAA TCTTACTCCT 
TTGATTGATA TGGTGTTTAT TCTGTTGATT TTTTTTATTG TGACCACTTC CTTCGTGAAG
GAAACGGGGG TTGAGGTCAA TCGGCCTTCA GCAGAGACAG CGGTACGCAA GGAACGGAGT
AATATTCTTA TTGCCATCCG CGCTAATGAT GAGATCTGGA TGGATCAGCG GCAGATCGAT
ATTCGTGCGG TGCGGGCCAA TGTGGAACGC TTGTATGCCG AGAACCCGGA GGGGGCCGTG
GTTATCGTCG CCGATGAGGA TTCCAAAACC GGGCTGGTGA TCAATGTGAT GGATCAGGCC
AGGTTGGCTG GGGTGACGGA CGTCTCTATC GCTGCTGCTA AAGATCAGTG A
 
Protein sequence
MREQYSQRQS GSAVNINLTP LIDMVFILLI FFIVTTSFVK ETGVEVNRPS AETAVRKERS 
NILIAIRAND EIWMDQRQID IRAVRANVER LYAENPEGAV VIVADEDSKT GLVINVMDQA
RLAGVTDVSI AAAKDQ