Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0609 |
Symbol | |
ID | 3706841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 655681 |
End bp | 656091 |
Gene Length | 411 bp |
Protein Length | 136 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 637737117 |
Product | biopolymer transport protein ExbD/TolR |
Protein accession | YP_342658 |
Protein GI | 77164133 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0848] Biopolymer transport protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.000633887 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGAGAAC AGTATAGCCA ACGCCAAAGC GGATCGGCAG TGAATATCAA TCTTACTCCT TTGATTGATA TGGTGTTTAT TCTGTTGATT TTTTTTATTG TGACCACTTC CTTCGTGAAG GAAACGGGGG TTGAGGTCAA TCGGCCTTCA GCAGAGACAG CGGTACGCAA GGAACGGAGT AATATTCTTA TTGCCATCCG CGCTAATGAT GAGATCTGGA TGGATCAGCG GCAGATCGAT ATTCGTGCGG TGCGGGCCAA TGTGGAACGC TTGTATGCCG AGAACCCGGA GGGGGCCGTG GTTATCGTCG CCGATGAGGA TTCCAAAACC GGGCTGGTGA TCAATGTGAT GGATCAGGCC AGGTTGGCTG GGGTGACGGA CGTCTCTATC GCTGCTGCTA AAGATCAGTG A
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Protein sequence | MREQYSQRQS GSAVNINLTP LIDMVFILLI FFIVTTSFVK ETGVEVNRPS AETAVRKERS NILIAIRAND EIWMDQRQID IRAVRANVER LYAENPEGAV VIVADEDSKT GLVINVMDQA RLAGVTDVSI AAAKDQ
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