| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Noc_0512 |
|---|
| Symbol | lolB |
|---|
| ID | 3706683 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Nitrosococcus oceani ATCC 19707 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007484 |
|---|
| Strand | + |
|---|
| Start bp | 553715 |
|---|
| End bp | 554320 |
|---|
| Gene Length | 606 bp |
|---|
| Protein Length | 201 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 50% |
|---|
| IMG OID | 637737021 |
|---|
| Product | outer membrane lipoprotein LolB |
|---|
| Protein accession | YP_342565 |
|---|
| Protein GI | 77164040 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG3017] Outer membrane lipoprotein involved in outer membrane biogenesis |
|---|
| TIGRFAM ID | [TIGR00548] outer membrane lipoprotein LolB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 36 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAGTGGT GCAGACTTTC GATTATACTA ATGAGCCTCA TCCTGCTTGC GGGCTGTATG
CCCCTTCGCC AACCTTCCCC TTCTGCCGAT CCTCAGCAAA CATGGCAGGA GCGCCAGTTT
GCCCTGCAAG AAATTGAAGA CTGGAATTTG AGTGGGCGCT TAGCAATCAA TGCTATCAAA
GAGGCTTGGA CGGGTACCTT GCGGTGGACG CAAAGGGGCG ATGAATTTAA AATTCTGTGG
CTTTTTCCCC TTGGACAGGG GAGTGTGGAG TTGTATGGTA ATCCTGACAG GGTTACTCTT
CGTGCCCCTA AGGAGGAACC AATGATCGCA ACCTCCGCAG AAGAACTCCT TGGGACTCGC
TTGGGGTGGT CCTTGCCCGT GAGTGGCCTG CGTTATTGGC TATTGGGATT GCCGGCACCA
GGATTACCTG TAGTCAAGTC GTCCTTAGAC TCTTTTGGGC GCTTGCTCCG TTTGTCCCAA
GGCGGTTGGC AAATCCGCTA TTTGGATTAT AAGTGGATTG AAAACTTTGC GCTTCCTGGT
AAAATCTTTT TAGAGCATCC AAAACTTCGG TTACGGCTCG TTATCGATCA CTGGCAGTTA
GGGTAA
|
|---|
| Protein sequence | MKWCRLSIIL MSLILLAGCM PLRQPSPSAD PQQTWQERQF ALQEIEDWNL SGRLAINAIK
EAWTGTLRWT QRGDEFKILW LFPLGQGSVE LYGNPDRVTL RAPKEEPMIA TSAEELLGTR
LGWSLPVSGL RYWLLGLPAP GLPVVKSSLD SFGRLLRLSQ GGWQIRYLDY KWIENFALPG
KIFLEHPKLR LRLVIDHWQL G
|
|---|
| |