Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0440 |
Symbol | |
ID | 3706611 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | - |
Start bp | 477642 |
End bp | 478046 |
Gene Length | 405 bp |
Protein Length | 134 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 637736950 |
Product | PilT protein-like |
Protein accession | YP_342494 |
Protein GI | 77163969 |
COG category | [R] General function prediction only |
COG ID | [COG1487] Predicted nucleic acid-binding protein, contains PIN domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.000179252 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCTGCGCT ACTTGCTGGA TACCAACATC TGCATTTTCA CCATTAAGAA CCGACCGGCG CGGGTTCGTG AGCGCTTCAA GCAGTTTGCC GATCAGTTGT GCATCAGCAG CGTGACCTGG ATGGAGCTGG TGTATAGCGT GGAGCGCTCA GCCAACCCGC AACACAATCT GGCGATTGCG GAGGGGCTGG CGGCGCGTCT CAGCGTGCTG GATTACGACG TCGAAGCGGC CAGCCACACG GGGCAGATCC GTGCTGAACT TGCGCGCCGT GGAACACCGA TAGGGCCGTA TGATCAAATG ATAGCCGGAC AGGCGCGCAG CCGTGGGCTG GTTGTGGTCA CCAACAACAC GTGCGAGTTC GCACGCGTTC CCGGCCTGCG ATGCGAGGAC TGGACAAAGC CATGA
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Protein sequence | MLRYLLDTNI CIFTIKNRPA RVRERFKQFA DQLCISSVTW MELVYSVERS ANPQHNLAIA EGLAARLSVL DYDVEAASHT GQIRAELARR GTPIGPYDQM IAGQARSRGL VVVTNNTCEF ARVPGLRCED WTKP
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