Gene Noc_0394 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0394 
Symbol 
ID3706565 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp436047 
End bp437045 
Gene Length999 bp 
Protein Length332 aa 
Translation table11 
GC content57% 
IMG OID637736906 
Producthypothetical protein 
Protein accessionYP_342450 
Protein GI77163925 
COG category[S] Function unknown 
COG ID[COG3272] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.117975 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACCCTC TTTCTGCCAG GGGCGAAATT CCGCCCTCCC TCTCTTCCCC CGAAATTCCC 
CGTCTACGCC TTGCCATAAG CAGTTGCTTG TTGGGAGAGA GAGTTCGCTT TGATGGTGGC
CATAAGCGGG ATACCTACAT CACCGAAGCG CTGAATGCCT ACTTTGACTT TGTTCCCGTT
TGCCCGGAGG TGGCGATTGG CATGGGAACG CCACGGGAAC CCATTCGGAT AGTCAAAACC
AGCCAGGGGC TACGGGCCAG GGGCGTCCGG CATTCGGAGC TGGATGTTAC CGACCCCTTG
CGCCAGTTTG GGGAAGTCAT GGCCGAAGAA CTGGGAGATA TTGACGGCTA TATATTAAAA
AAAGACTCCC CCAGCTGCGG GATGGAACGG GTGCGCGTTC ACGGCACCGG CGGCGCCCCC
TCCCGGACGG GCACCGGCCT CTATGCCCAG GTTTTCATGG CGCGGCGGCC GTGGCTGCCG
GTAGAAGAGG AGGGGCGTTT GAACGATCCG GTGCTGCGGG AGAACTTCTT TGAGCGGGTT
TTCGTGCATT ATCGTTGGCG GCAAATAGGG GCGGCGGGGA TAACGCCCGC CGCCCTGGTT
GAATTCCACA GCCGGCATAA ATTTATGGTC ATGGCTCATA GTCAGGCAGC ATATCGGCGT
TTGGGACGTT TAGTGGCGAA AGCGGGCAGT GAGTCCCTGG AAACATTAGC GCCGACCTAT
GAGGCAGAAT TAATGAGCGC CTTGAGACGG CGCGCTACCC GCAAGGGCCA TACCAATGTA
CTGATGCACC TGCTAGGCTT TTTACGCGCC CAGCTAGATA AAGCGGATCG GGCGGAACTA
CTCGAGTCCA TGGAAAGCTA CCGCTTGGGT TTAGTGCCTT TAATTGTGCC AATGACGTTG
CTCAAGCATC ACTTCCGCCG TCACCCCAAC CCCTACGTCA ACCAACAATA TTATTTGAAC
CCCCATCCTC CCGAGTTGAT GCTGCGGAAT TTGATTTAA
 
Protein sequence
MDPLSARGEI PPSLSSPEIP RLRLAISSCL LGERVRFDGG HKRDTYITEA LNAYFDFVPV 
CPEVAIGMGT PREPIRIVKT SQGLRARGVR HSELDVTDPL RQFGEVMAEE LGDIDGYILK
KDSPSCGMER VRVHGTGGAP SRTGTGLYAQ VFMARRPWLP VEEEGRLNDP VLRENFFERV
FVHYRWRQIG AAGITPAALV EFHSRHKFMV MAHSQAAYRR LGRLVAKAGS ESLETLAPTY
EAELMSALRR RATRKGHTNV LMHLLGFLRA QLDKADRAEL LESMESYRLG LVPLIVPMTL
LKHHFRRHPN PYVNQQYYLN PHPPELMLRN LI