Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0394 |
Symbol | |
ID | 3706565 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 436047 |
End bp | 437045 |
Gene Length | 999 bp |
Protein Length | 332 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 637736906 |
Product | hypothetical protein |
Protein accession | YP_342450 |
Protein GI | 77163925 |
COG category | [S] Function unknown |
COG ID | [COG3272] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.117975 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGACCCTC TTTCTGCCAG GGGCGAAATT CCGCCCTCCC TCTCTTCCCC CGAAATTCCC CGTCTACGCC TTGCCATAAG CAGTTGCTTG TTGGGAGAGA GAGTTCGCTT TGATGGTGGC CATAAGCGGG ATACCTACAT CACCGAAGCG CTGAATGCCT ACTTTGACTT TGTTCCCGTT TGCCCGGAGG TGGCGATTGG CATGGGAACG CCACGGGAAC CCATTCGGAT AGTCAAAACC AGCCAGGGGC TACGGGCCAG GGGCGTCCGG CATTCGGAGC TGGATGTTAC CGACCCCTTG CGCCAGTTTG GGGAAGTCAT GGCCGAAGAA CTGGGAGATA TTGACGGCTA TATATTAAAA AAAGACTCCC CCAGCTGCGG GATGGAACGG GTGCGCGTTC ACGGCACCGG CGGCGCCCCC TCCCGGACGG GCACCGGCCT CTATGCCCAG GTTTTCATGG CGCGGCGGCC GTGGCTGCCG GTAGAAGAGG AGGGGCGTTT GAACGATCCG GTGCTGCGGG AGAACTTCTT TGAGCGGGTT TTCGTGCATT ATCGTTGGCG GCAAATAGGG GCGGCGGGGA TAACGCCCGC CGCCCTGGTT GAATTCCACA GCCGGCATAA ATTTATGGTC ATGGCTCATA GTCAGGCAGC ATATCGGCGT TTGGGACGTT TAGTGGCGAA AGCGGGCAGT GAGTCCCTGG AAACATTAGC GCCGACCTAT GAGGCAGAAT TAATGAGCGC CTTGAGACGG CGCGCTACCC GCAAGGGCCA TACCAATGTA CTGATGCACC TGCTAGGCTT TTTACGCGCC CAGCTAGATA AAGCGGATCG GGCGGAACTA CTCGAGTCCA TGGAAAGCTA CCGCTTGGGT TTAGTGCCTT TAATTGTGCC AATGACGTTG CTCAAGCATC ACTTCCGCCG TCACCCCAAC CCCTACGTCA ACCAACAATA TTATTTGAAC CCCCATCCTC CCGAGTTGAT GCTGCGGAAT TTGATTTAA
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Protein sequence | MDPLSARGEI PPSLSSPEIP RLRLAISSCL LGERVRFDGG HKRDTYITEA LNAYFDFVPV CPEVAIGMGT PREPIRIVKT SQGLRARGVR HSELDVTDPL RQFGEVMAEE LGDIDGYILK KDSPSCGMER VRVHGTGGAP SRTGTGLYAQ VFMARRPWLP VEEEGRLNDP VLRENFFERV FVHYRWRQIG AAGITPAALV EFHSRHKFMV MAHSQAAYRR LGRLVAKAGS ESLETLAPTY EAELMSALRR RATRKGHTNV LMHLLGFLRA QLDKADRAEL LESMESYRLG LVPLIVPMTL LKHHFRRHPN PYVNQQYYLN PHPPELMLRN LI
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