Gene Noc_0358 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0358 
Symbol 
ID3706529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp392061 
End bp393788 
Gene Length1728 bp 
Protein Length575 aa 
Translation table11 
GC content55% 
IMG OID637736870 
ProductCl- channel, voltage gated 
Protein accessionYP_342414 
Protein GI77163889 
COG category[P] Inorganic ion transport and metabolism 
COG ID[COG0038] Chloride channel protein EriC 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGTTCAATT TGTTCAATCT AAAAACTCCC TTAGAAAATC TGCGAATCCG TGTCGCTTCG 
GCAGAGGCCC TGCCCCAGCT CTCCCTCCTT GGCTTACTGA CAGGGTTGCT GGCGGGAGGA
GGGACCGTGG CTTTTCGGCT AGCGGTGGAT GTGGATCAGA TTGCCCTGCT TCCTAGCCAC
CAGGTAGATG ATTTTGAAAG TCTCGATTGG CTCGAACGGT TATTGTTCCC CATCGTGGGG
GGCCTGAGCA TCGGATTGCT ACAAGAGCTT GCCCATACCT ATCGTGCGGT GGGGGTGGTG
CATGTTTTAG AGCGGATTGC CTATTACCAG GGTCGCCTGC CTTGGCGTAA TGCCCTGCAG
CAATTTGTGA CGGGCGCACT CTCTATTATC TGTGGCCACT CGGTGGGACG GGAAGGCCCT
AGTGTGCATC TAGGGGCTGC TGGTGGCAGC TTGCTGGGAC AATGGCTGGA ATTGCCTAAT
AATGCCCTCC GTACTTTAGT AGCCTGCGGT ATTGCGGCGG CCATCGCGGC TTCCTTTAAT
ACTCCTCTGG CAGGTGTCCT CTTCTCAATG GAGGTCATCA TGATGCAATA TCAACTCGCC
GGGGTGGCGC CTATCATTCT GGCTGCCGTG GTAGGGGCTG CCATCTCCTG GGCCGTGTTT
GGCCCTTCAC CCGCTTTTTT CGTGCCTCCC ACCGAAATGC ATTCCCTGCT TGATTTCCCT
TATCTGGTCT TGATTGGCTT CGTCGTGGGA ATTTTGGCGG CTGTTTATAA TCGGTTAATG
CGCTTTTTTT CCGGGTTGGA GAAGCAGCGC CCTGTGTGGC AACGCTGCAC CGCTGCTGGG
CTGCTAGTCG GCCTTTGTAG TATTGCCGTC CCCGAAATCA TGGGCCTGGG TTACGATACG
GTAAACGCCA TACTTATGGG TCAATTTGGT CTGAGTGCTC TGGTCGTCAT CACTATCGTT
AAATTATTTG CCACCACTGC TTGCGTGGGC CTGGGCATAC CAGGAGGGCT TATTGGTCCC
ACCCTGGTTA TTGGCACTGC GGCGGGCGGT GCGTTAGGAA TTATTGGCAC GGCTTTGCTG
CCGCAAGAAG CATCCCCTAT TGCCCTTTAT GCCATGGTGG GGATGGCCGC CATGATGAGC
GCAACCTTAC AAGCACCCCT GGCGGCCCTT ATGGCCTTGG TAGAACTGAC CGCCGGTACC
TATATCCTTT TTCCAGGAAT GCTAGCAGTA GTCGTAGCTA ATTTGGTGGC GCGAGAGGGG
CTTCATCAAC AGGCTCTGTT TCTGATGCTA CTGCGAACTC ACGGCCTAGA CTATCATTAT
GCGCCCATCT CTCTCAGGCT CCGGCAAGCC GGGGTGGCAA GCGTGATGGA TCGCCACTTT
GTAGAACTAC CCGTTATCAC TGATCGGGAA GCCGCACTTC AAGCCCTCGC GCAAAATCCC
CGTTGGGTGC TGGTGAAACA GGATTTCCAG CCCCATTCCG TAGTGCAGGC TGCTGATGTG
GCCCGAGCCT TAAGCGATGA AGAACAAGGG TCTCTCAATC TCATGGAAAT TCCCGCAGTC
CGGGAAGATA TCCAGGCTGT CTCTTTCTAT GCGACCCTCC AGGAAGCCCT GGAAATCCTT
GATGCTAGCC AAGCTAAAAT GCTGTATGTG ACGCGGCGCA TAGGACCCAC CCGCATACGA
ACGTATGGAG TATTAAGCCG GCAAGATATT GAGTCTTATT ACGGCTAG
 
Protein sequence
MFNLFNLKTP LENLRIRVAS AEALPQLSLL GLLTGLLAGG GTVAFRLAVD VDQIALLPSH 
QVDDFESLDW LERLLFPIVG GLSIGLLQEL AHTYRAVGVV HVLERIAYYQ GRLPWRNALQ
QFVTGALSII CGHSVGREGP SVHLGAAGGS LLGQWLELPN NALRTLVACG IAAAIAASFN
TPLAGVLFSM EVIMMQYQLA GVAPIILAAV VGAAISWAVF GPSPAFFVPP TEMHSLLDFP
YLVLIGFVVG ILAAVYNRLM RFFSGLEKQR PVWQRCTAAG LLVGLCSIAV PEIMGLGYDT
VNAILMGQFG LSALVVITIV KLFATTACVG LGIPGGLIGP TLVIGTAAGG ALGIIGTALL
PQEASPIALY AMVGMAAMMS ATLQAPLAAL MALVELTAGT YILFPGMLAV VVANLVAREG
LHQQALFLML LRTHGLDYHY APISLRLRQA GVASVMDRHF VELPVITDRE AALQALAQNP
RWVLVKQDFQ PHSVVQAADV ARALSDEEQG SLNLMEIPAV REDIQAVSFY ATLQEALEIL
DASQAKMLYV TRRIGPTRIR TYGVLSRQDI ESYYG