Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0358 |
Symbol | |
ID | 3706529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 392061 |
End bp | 393788 |
Gene Length | 1728 bp |
Protein Length | 575 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 637736870 |
Product | Cl- channel, voltage gated |
Protein accession | YP_342414 |
Protein GI | 77163889 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG0038] Chloride channel protein EriC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGTTCAATT TGTTCAATCT AAAAACTCCC TTAGAAAATC TGCGAATCCG TGTCGCTTCG GCAGAGGCCC TGCCCCAGCT CTCCCTCCTT GGCTTACTGA CAGGGTTGCT GGCGGGAGGA GGGACCGTGG CTTTTCGGCT AGCGGTGGAT GTGGATCAGA TTGCCCTGCT TCCTAGCCAC CAGGTAGATG ATTTTGAAAG TCTCGATTGG CTCGAACGGT TATTGTTCCC CATCGTGGGG GGCCTGAGCA TCGGATTGCT ACAAGAGCTT GCCCATACCT ATCGTGCGGT GGGGGTGGTG CATGTTTTAG AGCGGATTGC CTATTACCAG GGTCGCCTGC CTTGGCGTAA TGCCCTGCAG CAATTTGTGA CGGGCGCACT CTCTATTATC TGTGGCCACT CGGTGGGACG GGAAGGCCCT AGTGTGCATC TAGGGGCTGC TGGTGGCAGC TTGCTGGGAC AATGGCTGGA ATTGCCTAAT AATGCCCTCC GTACTTTAGT AGCCTGCGGT ATTGCGGCGG CCATCGCGGC TTCCTTTAAT ACTCCTCTGG CAGGTGTCCT CTTCTCAATG GAGGTCATCA TGATGCAATA TCAACTCGCC GGGGTGGCGC CTATCATTCT GGCTGCCGTG GTAGGGGCTG CCATCTCCTG GGCCGTGTTT GGCCCTTCAC CCGCTTTTTT CGTGCCTCCC ACCGAAATGC ATTCCCTGCT TGATTTCCCT TATCTGGTCT TGATTGGCTT CGTCGTGGGA ATTTTGGCGG CTGTTTATAA TCGGTTAATG CGCTTTTTTT CCGGGTTGGA GAAGCAGCGC CCTGTGTGGC AACGCTGCAC CGCTGCTGGG CTGCTAGTCG GCCTTTGTAG TATTGCCGTC CCCGAAATCA TGGGCCTGGG TTACGATACG GTAAACGCCA TACTTATGGG TCAATTTGGT CTGAGTGCTC TGGTCGTCAT CACTATCGTT AAATTATTTG CCACCACTGC TTGCGTGGGC CTGGGCATAC CAGGAGGGCT TATTGGTCCC ACCCTGGTTA TTGGCACTGC GGCGGGCGGT GCGTTAGGAA TTATTGGCAC GGCTTTGCTG CCGCAAGAAG CATCCCCTAT TGCCCTTTAT GCCATGGTGG GGATGGCCGC CATGATGAGC GCAACCTTAC AAGCACCCCT GGCGGCCCTT ATGGCCTTGG TAGAACTGAC CGCCGGTACC TATATCCTTT TTCCAGGAAT GCTAGCAGTA GTCGTAGCTA ATTTGGTGGC GCGAGAGGGG CTTCATCAAC AGGCTCTGTT TCTGATGCTA CTGCGAACTC ACGGCCTAGA CTATCATTAT GCGCCCATCT CTCTCAGGCT CCGGCAAGCC GGGGTGGCAA GCGTGATGGA TCGCCACTTT GTAGAACTAC CCGTTATCAC TGATCGGGAA GCCGCACTTC AAGCCCTCGC GCAAAATCCC CGTTGGGTGC TGGTGAAACA GGATTTCCAG CCCCATTCCG TAGTGCAGGC TGCTGATGTG GCCCGAGCCT TAAGCGATGA AGAACAAGGG TCTCTCAATC TCATGGAAAT TCCCGCAGTC CGGGAAGATA TCCAGGCTGT CTCTTTCTAT GCGACCCTCC AGGAAGCCCT GGAAATCCTT GATGCTAGCC AAGCTAAAAT GCTGTATGTG ACGCGGCGCA TAGGACCCAC CCGCATACGA ACGTATGGAG TATTAAGCCG GCAAGATATT GAGTCTTATT ACGGCTAG
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Protein sequence | MFNLFNLKTP LENLRIRVAS AEALPQLSLL GLLTGLLAGG GTVAFRLAVD VDQIALLPSH QVDDFESLDW LERLLFPIVG GLSIGLLQEL AHTYRAVGVV HVLERIAYYQ GRLPWRNALQ QFVTGALSII CGHSVGREGP SVHLGAAGGS LLGQWLELPN NALRTLVACG IAAAIAASFN TPLAGVLFSM EVIMMQYQLA GVAPIILAAV VGAAISWAVF GPSPAFFVPP TEMHSLLDFP YLVLIGFVVG ILAAVYNRLM RFFSGLEKQR PVWQRCTAAG LLVGLCSIAV PEIMGLGYDT VNAILMGQFG LSALVVITIV KLFATTACVG LGIPGGLIGP TLVIGTAAGG ALGIIGTALL PQEASPIALY AMVGMAAMMS ATLQAPLAAL MALVELTAGT YILFPGMLAV VVANLVAREG LHQQALFLML LRTHGLDYHY APISLRLRQA GVASVMDRHF VELPVITDRE AALQALAQNP RWVLVKQDFQ PHSVVQAADV ARALSDEEQG SLNLMEIPAV REDIQAVSFY ATLQEALEIL DASQAKMLYV TRRIGPTRIR TYGVLSRQDI ESYYG
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