Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Noc_0318 |
Symbol | xerC |
ID | 3706489 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Nitrosococcus oceani ATCC 19707 |
Kingdom | Bacteria |
Replicon accession | NC_007484 |
Strand | + |
Start bp | 343746 |
End bp | 344648 |
Gene Length | 903 bp |
Protein Length | 300 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 637736832 |
Product | site-specific tyrosine recombinase XerC |
Protein accession | YP_342376 |
Protein GI | 77163851 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | [TIGR02224] tyrosine recombinase XerC |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAAGAGG AACAGCAAAT TTGGATACAA AAATTCTTTA CTCATCTCCA GTATGAGCGG GGATTATCGC CGCAAACGGT TGTTAGTTAC CGTCGTGACC TTGCAAAAGC TATTGCCTTT TGCGGCCGCA ATGGGATCGG GAACTGGCAA GAACTGGATG CCCAAAGAGT GCGGGCGCTG GTGGTCGCCC ATCACCAGGC GGGGCTTTCC GGAAGGAGTA TTCAACGTCT TTTGTCGGCC CTCCGTAGCT TCTACGTCTA CCTGCAGCGT GAAAACATCG TGGATCATAA TCCGGCTCAA GGGATTTCCG CTCCCAAGGG GAAACGGGCG TTGCCCCCTA GCCTTGATGT GGATCAAACT GCCCAATTAT TGAATACTCA ACCTTGTAGC GATCTCTTGC TTCGCGATCA AGCCATACTG GAGTTATTCT ATTCTTCCGG ACTACGGTTG GCTGAATTGG TTGGCTTGAA TTTAAGCGCT TTGGACCTGG ATACCGCTTT AGTGCGGGTC GTTGGCAAAG GCGCCAAAAC GCGGGAAGTC CCCCTTGGTA GGCGGGCTAA AGTAGCCCTG TTAGCCTGGC TTCCAGTACG GGCAGGGTGG ATCAACCAGA GCCAAGAGGC CGTCTTTATA ACTCGCCACG GCCGCCGTCT CTCTCCCCGC GCGGTACAAA AACGGCTGCG TCTTTGGGGG CTGCGGCAAG GCTTCGATGT GGCCATCCAT CCCCATCGCC TGCGGCATGC TTTTGCCTCC CATTTACTGG AATCCAGCGG TGATTTGCGG GCAGTGCAGG AACTATTAGG CCATGCCGAT ATCAGTACGA CGCAAATTTA TACCCATTTG GATTTTCAAC ACCTTGCTAA AATTTATGAT CAAACCCATC CCCGAGCTAG AAAAAAGCGC TAG
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Protein sequence | MEEEQQIWIQ KFFTHLQYER GLSPQTVVSY RRDLAKAIAF CGRNGIGNWQ ELDAQRVRAL VVAHHQAGLS GRSIQRLLSA LRSFYVYLQR ENIVDHNPAQ GISAPKGKRA LPPSLDVDQT AQLLNTQPCS DLLLRDQAIL ELFYSSGLRL AELVGLNLSA LDLDTALVRV VGKGAKTREV PLGRRAKVAL LAWLPVRAGW INQSQEAVFI TRHGRRLSPR AVQKRLRLWG LRQGFDVAIH PHRLRHAFAS HLLESSGDLR AVQELLGHAD ISTTQIYTHL DFQHLAKIYD QTHPRARKKR
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