Gene Noc_0297 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0297 
Symbol 
ID3706468 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand- 
Start bp326375 
End bp327097 
Gene Length723 bp 
Protein Length240 aa 
Translation table11 
GC content49% 
IMG OID637736812 
Productcytochrome c1 
Protein accessionYP_342356 
Protein GI77163831 
COG category[C] Energy production and conversion 
COG ID[COG2857] Cytochrome c1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value0.434279 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAAGAA TGACGACGTG TTTACTCCTT TTTATCTCAT CGACCTCCTT GGTTTGGGCC 
GCATCAAGCA ACTACCCTCT CGATACCGTG GAGATAAATA TCAATGATAA GGCCTCTTTA 
CAACGGGGCG CCCAGGTATT TATGAATTAC TGCCTTAGCT GTCACTCGGC CAAATATATG 
CGCTATAGCC GAATGGCGCA GGATCTCGGC CTGACCGAGC AGGAGGTCAC CGATAACCTG 
ATGTTTACCA CCGATAAGAT CCACGATCCC ATGACCATCG CAATGCAGTC CAAGGATTCC 
GAAGGCTGGT TTGGCGTAAC CCCGCCCGAT CTGTCTTTGG TTGCTCGTTC TCGGGGTCCC 
GAATGGCTAC ATACTTATCT GCGAACTTTT TACCTGGATC CTAGCCGCCC TACCGGCGTC 
AATAATTTGG TATTCAAGGA CACCGCCATG CCCCATGTTT TGTGGCCTCT GCAAGGCTGG 
CAGGAGCTTG CGGATAAAGA TAGCGATACC TCCAGTACAA AGCTTGAGTT AGCGGTTGCG 
GGTACCCTGA GTCCTAGCGA GTACGAGAAA ATGCTGGATG ATTTAGTCAA TTTTATGACC 
TATATGGGTG AACCCGCGCG GCTTGAGCGG GAGAAACTTG GCCCTTGGGT TCTGTTTTAT 
ATTGCGCTCT TTTGTGGTGT CGCCTATTTC CTTAAAAGGG AATACTGGAA AGATATTCAT 
TGA
 
Protein sequence
MKRMTTCLLL FISSTSLVWA ASSNYPLDTV EININDKASL QRGAQVFMNY CLSCHSAKYM 
RYSRMAQDLG LTEQEVTDNL MFTTDKIHDP MTIAMQSKDS EGWFGVTPPD LSLVARSRGP 
EWLHTYLRTF YLDPSRPTGV NNLVFKDTAM PHVLWPLQGW QELADKDSDT SSTKLELAVA 
GTLSPSEYEK MLDDLVNFMT YMGEPARLER EKLGPWVLFY IALFCGVAYF LKREYWKDIH