Gene Noc_0276 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0276 
Symbol 
ID3706447 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand+ 
Start bp305219 
End bp305893 
Gene Length675 bp 
Protein Length224 aa 
Translation table11 
GC content45% 
IMG OID637736792 
Producttwo component transcription LuxR family regulatory protein 
Protein accessionYP_342336 
Protein GI77163811 
COG category[T] Signal transduction mechanisms 
COG ID[COG4566] Response regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.00306595 
Plasmid hitchhikingNo 
Plasmid clonabilitydecreased coverage 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATAGGA TGAATCAATG TTTCCCAAGC GCTCACGATC ACTCTGGAAG CCAGCATAAT 
TTTGAAGCAA GAGTCTTTAT CGTTAATAGT GATGAGAAGA CACATAGTTC GTTGTGCCGA 
ATGATTGCTT CCGCCGGGTG GCGTACTAAA TCCTATTTCT CGGCTGAGTC CTTTTTGGAC 
AAATTTGACC CTGCCCACCC AGGCTGTCTA CTGCTCGATA ATCATGTCTC CGAGATGGGC 
GGCTTATCAT TGCAGCAAGA ATTGCGGGAC CGGAATAGTT TAACTCCTGT TCTTTTTACT 
TCTTCCCAGG GAACAGTGCC CGAGGCAGTA GAGGCTATCC ATGGTGGGGC GGTTAACTTT 
TTTACCCGGC CCTTGGAAAA GCCATTATTA ATGAAATGTA TCCGGGAAAG TATTGAGAAG 
AGTCAATATC TCCGGGAAGA ACAAAAAGAA CGGGAAGAAA TTATCATAAG GATGATGCGC 
TTGACTCCAC GGGAAAGGGA AGTTATGGCG CTAGTACTGA AGGGGCAGCC TAATAAGTTG 
ATTGCCTCCG ATCTAGATAT TAGTATCAAA ACAGTCGAAA TTCATCGGGG TCAAGTGATG 
AAAAAACTTC AAGTGCGGAC TCAAGCTGAT TTGATCCACT TGGCTCTTTC ATATCCAAGC 
GAAATGGAGC ATTGA
 
Protein sequence
MNRMNQCFPS AHDHSGSQHN FEARVFIVNS DEKTHSSLCR MIASAGWRTK SYFSAESFLD 
KFDPAHPGCL LLDNHVSEMG GLSLQQELRD RNSLTPVLFT SSQGTVPEAV EAIHGGAVNF 
FTRPLEKPLL MKCIRESIEK SQYLREEQKE REEIIIRMMR LTPREREVMA LVLKGQPNKL 
IASDLDISIK TVEIHRGQVM KKLQVRTQAD LIHLALSYPS EMEH