Gene Noc_0269 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagNoc_0269 
Symbol 
ID3706440 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameNitrosococcus oceani ATCC 19707 
KingdomBacteria 
Replicon accessionNC_007484 
Strand
Start bp297683 
End bp298813 
Gene Length1131 bp 
Protein Length376 aa 
Translation table11 
GC content49% 
IMG OID637736785 
Producttransaldolase 
Protein accessionYP_342329 
Protein GI77163804 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0176] Transaldolase 
TIGRFAM ID[TIGR00876] transaldolase, mycobacterial type 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATTCGC TTCTAAAGTT GCTGGAATTC GGACAAAGTT ACTGGATCGA TAACCTTACC 
CGGCGCATGA TAAAAAACGG AGAATTAAAG CACCGGGTTG AAGAGCAAGG TCTGGGCGGG
GTCACCTCCA ACCCCAGCAT TTTCCATAAG GCCATTGCTA ACAGCGATGA TTACGACCCA
CAGATTGAAA CCCTGATCCG GGAAGGCCGC TCTAAAATTG AAATTTATGA GGCCCTCATC
ACCACCGATA TCCGGGATGC CTGCGATATT CTCCATCCTG TCTATAAAGA ACGAAAGGGC
CAGGATGGTT TTGTCAGCCT TGAAGTTTCA CCCTATCTTG CCCATGACAC CGAAGGGTCT
ATTCAGGAAG CCCGGCGCCT ATGGCAAACT GTGGACCGAC CCAATTTATT TATCAAAATT
CCCGGTACTG CCGCCGGTGT GCCTGCTATT GAAGAATTGC TCTTCGAGGG AATCAACATC
AACATTACTC TGCTATTTTC CATCGACCAT TACCAGGCCG TGGCCGAAGC CTATCTCAGA
GCGCTGGAAC GGCGCCTTGA AGCGGGCCAA ACTGTAGAGA ACATCGCCTC GGTAGCCAGC
TTCTTTCTAA GCCGGATCGA TGTTCTGGCC GACCAGCTCC TAAGCCATCG CATTCCACCA
GAGGGAAAAT CCCCTTCAGC CCCTCATCCG GAAAACCTAC GAGGCAAGGT GGCCATAGCC
AACGCCAAAT TAGCTTACCA GCGTTTTAAG GAAATTCTCC AAAGTGAACG CTGGAAAACA
CTTGCAGGCA AAGGAGCCCA AGTACAGCGT ATGCTCTGGG CTAGCACTAG CACCAAGAAT
CCGGCTTACC GGGATGTGAT GTACGTCGAA CCTCTCATTG GCCCTTATAC AGTCAACACC
CTGCCGGAAA AAACAATTAA AGCTTTTGCC GACCACGGTA TCGTTAAAGA AACGGTAGAA
GAAAATATTG AAGAATCTCG AAAAGTTTTT GCCGATCTGG AAAAAATTGG CATTGATTTC
AATTTAGTCA CCGCCCAGCT GGAAAATGAG GGCGTGCAGA AATTTATCGA TCCTTACGAT
GCCCTGCTAG CAATGTTGGA AGCCAAATGC GAAGACTGTA AAAACAGGTA G
 
Protein sequence
MDSLLKLLEF GQSYWIDNLT RRMIKNGELK HRVEEQGLGG VTSNPSIFHK AIANSDDYDP 
QIETLIREGR SKIEIYEALI TTDIRDACDI LHPVYKERKG QDGFVSLEVS PYLAHDTEGS
IQEARRLWQT VDRPNLFIKI PGTAAGVPAI EELLFEGINI NITLLFSIDH YQAVAEAYLR
ALERRLEAGQ TVENIASVAS FFLSRIDVLA DQLLSHRIPP EGKSPSAPHP ENLRGKVAIA
NAKLAYQRFK EILQSERWKT LAGKGAQVQR MLWASTSTKN PAYRDVMYVE PLIGPYTVNT
LPEKTIKAFA DHGIVKETVE ENIEESRKVF ADLEKIGIDF NLVTAQLENE GVQKFIDPYD
ALLAMLEAKC EDCKNR